RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PBDC1Q9BVG4 233 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 LAMP3Q9UQV4 416 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 OR13C7P0DN81 318 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 GZMBP10144 247 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 TNFRSF1AP19438 455 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 PLA2G5P39877 138 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 RHEBQ15382 184 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 LFNGQ8NES3 379 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 CD300LFQ8TDQ1 290 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 RPRMQ9NS64 109 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 CBLN4Q9NTU7 201 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 PKDREJQ9NTG1 2253 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 UBE2L5PA0A1B0GUS4 154 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 CEBPZOSA8MTT3 80 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 K7EP13 123 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 HPRT1P00492 218 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 PPBPP02775 128 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 ERVFC1-1P60608 527 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 SP5Q6BEB4 398 aaPredicted RBP12.24□□□□□ -0.45
PRNP-201ENST00000379440 WDR61Q9GZS3 305 aaKnown RBP12.24□□□□□ -0.45
PRNP-201ENST00000379440 LPAR2Q9HBW0 351 aa12.24□□□□□ -0.45
PRNP-201ENST00000379440 C20orf202A1L168 122 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 RBFOX3A6NFN3 312 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 ZNF705GA8MUZ8 300 aaPredicted RBP12.23□□□□□ -0.45
PRNP-201ENST00000379440 MRPL52Q86TS9 123 aaKnown RBP12.23□□□□□ -0.45
PRNP-201ENST00000379440 S1PR3Q99500 378 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 VKORC1Q9BQB6 163 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 ACTR3CQ9C0K3 210 aaPredicted RBP12.23□□□□□ -0.45
PRNP-201ENST00000379440 SAP30LQ9HAJ7 183 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 SAA2-SAA4A0A096LPE2 208 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 A0A1W2PPE2 198 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 PMS2P5A8MQ11 134 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 SAA2P0DJI9 122 aaPredicted RBP12.23□□□□□ -0.45
PRNP-201ENST00000379440 OR5I1Q13606 314 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 CCL17Q92583 94 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 TANC2Q9HCD6 1990 aa12.23□□□□□ -0.45
PRNP-201ENST00000379440 YLPM1P49750 1951 aaKnown RBP12.22□□□□□ -0.45
PRNP-201ENST00000379440 TRAV3A0A0B4J244 114 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 SHISA9B4DS77 424 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 E7EQL1 145 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST1H2BKO60814 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST1H2BJP06899 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST1H2BOP23527 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST1H2BBP33778 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST1H2BDP58876 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST1H2BCP62807 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST2H2BEQ16778 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.22□□□□□ -0.45
PRNP-201ENST00000379440 PRAMEF5Q5TYX0 476 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 LYG1Q8N1E2 194 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST1H2BHQ93079 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST1H2BNQ99877 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HIST1H2BMQ99879 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 VPS25Q9BRG1 176 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 C20orf24Q9BUV8 137 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 SLC35B3Q9H1N7 401 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 ZNRD1Q9P1U0 126 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 HCFC1P51610 2035 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 FCN3O75636 299 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 ZNF674Q2M3X9 581 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 FAM216AQ8WUB2 273 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 DDB2Q92466 427 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 TAF15Q92804 592 aaKnown RBP eCLIP12.22□□□□□ -0.45
PRNP-201ENST00000379440 YPEL4Q96NS1 127 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 IDI2-AS1Q9NZ38 188 aa12.22□□□□□ -0.45
PRNP-201ENST00000379440 A0A1B0GW64 132 aa12.21□□□□□ -0.45
PRNP-201ENST00000379440 NKX6-3A6NJ46 265 aa12.21□□□□□ -0.45
PRNP-201ENST00000379440 RAB7AP51149 207 aa12.21□□□□□ -0.45
PRNP-201ENST00000379440 ELLP55199 621 aaPredicted RBP12.21□□□□□ -0.45
PRNP-201ENST00000379440 ZNF726P1Q15940 193 aa12.21□□□□□ -0.45
PRNP-201ENST00000379440 LHFPL4Q7Z7J7 247 aa12.21□□□□□ -0.45
PRNP-201ENST00000379440 KIAA1456Q9P272 454 aa12.21□□□□□ -0.45
PRNP-201ENST00000379440 ZFP30Q9Y2G7 519 aa12.21□□□□□ -0.45
PRNP-201ENST00000379440 POLEQ07864 2286 aa12.21□□□□□ -0.46
PRNP-201ENST00000379440 ATP6V1FQ16864 119 aa12.21□□□□□ -0.46
PRNP-201ENST00000379440 ZNF439Q8NDP4 499 aa12.21□□□□□ -0.46
PRNP-201ENST00000379440 RNASE6Q93091 150 aaKnown RBP12.21□□□□□ -0.46
PRNP-201ENST00000379440 PSMG3Q9BT73 122 aaPredicted RBP12.21□□□□□ -0.46
PRNP-201ENST00000379440 ZZEF1O43149 2961 aa12.21□□□□□ -0.46
PRNP-201ENST00000379440 TMEM178BH3BS89 294 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 OR2C1O95371 312 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 LCN15Q6UWW0 184 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 DPPA3Q6W0C5 159 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 OR10P1Q8NGE3 313 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 LINC01560Q8TB33 94 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 HIST1H2BLQ99880 126 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 SLC25A10Q9UBX3 287 aaPredicted RBP12.2□□□□□ -0.46
PRNP-201ENST00000379440 TRAV38-1A0A0B4J264 116 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 CEBPGP53567 150 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 FGF8P55075 233 aaPredicted RBP12.2□□□□□ -0.46
PRNP-201ENST00000379440 Q5PR19 223 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 OR4A16Q8NH70 328 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 CIB3Q96Q77 187 aaPredicted RBP12.2□□□□□ -0.46
PRNP-201ENST00000379440 RAB9BQ9NP90 201 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 SPTA1P02549 2419 aa12.2□□□□□ -0.46
PRNP-201ENST00000379440 PPIAL4EA0A075B759 164 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 FAM90A27PA6NNH2 459 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 PPIAL4DF5H284 164 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 RBFOX2O43251 390 aaKnown RBP eCLIP12.19□□□□□ -0.462e-8■■■□□ 19.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms