RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ZNF345Q14585 488 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 RSPO4Q2I0M5 234 aaPredicted RBP9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 NEUROG1Q92886 237 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 A0A1W2PRX2 142 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 A1L4Q6 167 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 SMIM13P0DJ93 91 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 ZIC4Q8N9L1 334 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 OR11H4Q8NGC9 324 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 HMGCLL1Q8TB92 370 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 OR11H12B2RN74 326 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 OR11H1Q8NG94 326 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 OR11H2Q8NH07 326 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 OR2H2O95918 312 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 PAX2Q02962 417 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 TMEM92Q6UXU6 159 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 GGTLC3B5MD39 225 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 OR13A1Q8NGR1 328 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 MRM2Q9UI43 246 aaKnown RBP9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 ST6GALNAC2Q9UJ37 374 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 IGHV1-69-2A0A0G2JMI3 117 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 SPSB4Q96A44 273 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 MS4A6AQ9H2W1 248 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 NDUFB4O95168 129 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 CTGFP29279 349 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 ZNF488Q96MN9 340 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 NPIPB4C9JG80 1138 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 SOCS1O15524 211 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 CYB5R3P00387 301 aaPredicted RBP9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 APOBEC3AP31941 199 aaPredicted RBP9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 LCN2P80188 198 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 SMRP1Q8NCR6 262 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 NEU4Q8WWR8 484 aaPredicted RBP9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 CCL4P13236 92 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 RARRES2Q99969 163 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 PKD1L2Q7Z442 2459 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 RRHO14718 337 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 NCMAPQ5T1S8 102 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 GOLT1AQ6ZVE7 132 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 ABHD12Q8N2K0 398 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 PARD6GQ9BYG4 376 aaPredicted RBP9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 ASB1Q9Y576 335 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 RPRMQ9NS64 109 aa9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 PEF1Q9UBV8 284 aaKnown RBP9.66□□□□□ -0.86
PTCHD1-201ENST00000379361 IGHV1-45A0A0A0MS14 117 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 IGLV3-25P01717 112 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 PARLQ9H300 379 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 YBX2Q9Y2T7 364 aaKnown RBP9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 MARCH11A6NNE9 402 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 PLNP26678 52 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 MVDP53602 400 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 SPTBN4Q9H254 2564 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 CD33P20138 364 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 REG1AP05451 166 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 SRSF12Q8WXF0 261 aaKnown RBP9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 UCN2Q96RP3 112 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 LOC102723996A0A087X1L8 192 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 LYZL2Q7Z4W2 148 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 BRWD3Q6RI45 1802 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 ERGP11308 486 aa9.65□□□□□ -0.86
PTCHD1-201ENST00000379361 A0A1B0GW15 77 aa9.65□□□□□ -0.87
PTCHD1-201ENST00000379361 TCRBV16S1A1N1A0A5B0 115 aa9.65□□□□□ -0.87
PTCHD1-201ENST00000379361 M0R381 172 aa9.65□□□□□ -0.87
PTCHD1-201ENST00000379361 SELENOHQ8IZQ5 122 aaKnown RBP9.65□□□□□ -0.87
PTCHD1-201ENST00000379361 CXorf65A6NEN9 183 aa9.65□□□□□ -0.87
PTCHD1-201ENST00000379361 UCP3P55916 312 aa9.65□□□□□ -0.87
PTCHD1-201ENST00000379361 PRSS41Q7RTY9 318 aa9.65□□□□□ -0.87
PTCHD1-201ENST00000379361 STPG2Q8N412 459 aa9.65□□□□□ -0.87
PTCHD1-201ENST00000379361 PRADC1Q9BSG0 188 aa9.65□□□□□ -0.87
PTCHD1-201ENST00000379361 NPCDR1Q9BY65 106 aa9.65□□□□□ -0.87
PTCHD1-201ENST00000379361 LINC00587B1AMM8 73 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 ZNF600Q6ZNG1 722 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 TRGV11A0A075B6L2 103 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 OR51M1Q9H341 326 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 TGIF2-C20orf24A0A0A6YYL0 155 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 RTN4RL2Q86UN3 420 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 PNKDQ8N490 385 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 ASPDHA6ND91 283 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 TNFRSF9Q07011 255 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 TMEFF2Q9UIK5 374 aaPredicted RBP9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 CELA2BP08218 269 aaPredicted RBP9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 CBLN4Q9NTU7 201 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 JMJD1CQ15652 2540 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 TM4SF5O14894 197 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 HSPB1P04792 205 aaKnown RBP9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 SLC25A38Q96DW6 304 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 FMC1Q96HJ9 113 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 PTPRBP23467 1997 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 TMEM50AO95807 157 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 TDGF1P3P51864 188 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 WDR82Q6UXN9 313 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 OR10S1Q8NGN2 331 aa9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 MRPL20Q9BYC9 149 aaKnown RBP9.64□□□□□ -0.87
PTCHD1-201ENST00000379361 PTP4A3O75365 173 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 TRGC2P03986 189 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 ATP6V0CP27449 155 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 MRPL18Q9H0U6 180 aaKnown RBP9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 PRR13Q9NZ81 148 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 DSCR9P59020 149 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 OR10J3Q5JRS4 329 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms