RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 HSPE1P61604 102 aaKnown RBP12.39□□□□□ -0.43
PRDM16-203ENST00000378391 TTC9CQ8N5M4 171 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 NEUROG1Q92886 237 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 GOLGB1Q14789 3259 aaKnown RBP12.39□□□□□ -0.43
PRDM16-203ENST00000378391 HEATR5BQ9P2D3 2071 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 C16orf97H3BN30 126 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 SNRPCP09234 159 aaKnown RBP12.39□□□□□ -0.43
PRDM16-203ENST00000378391 CCDC144NLQ6NUI1 221 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 VOPP1Q96AW1 172 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 MRAP2Q96G30 205 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 F2RL2O00254 374 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 RBFOX2O43251 390 aaKnown RBP eCLIP12.38□□□□□ -0.43
PRDM16-203ENST00000378391 PMVKQ15126 192 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 FOXC1Q12948 553 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 MRPS16Q9Y3D3 137 aaKnown RBP12.38□□□□□ -0.43
PRDM16-203ENST00000378391 R4GN57 208 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 TRPM7Q96QT4 1865 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 TRBV9A0A0B4J1U6 114 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 KIR2DL2P43627 348 aaPredicted RBP12.38□□□□□ -0.43
PRDM16-203ENST00000378391 RPL8P62917 257 aaKnown RBP12.38□□□□□ -0.43
PRDM16-203ENST00000378391 DIRC2Q96SL1 478 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 SFXN3Q9BWM7 321 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 PLXNA4Q9HCM2 1894 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 C17orf51A8MQB3 221 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 RNF126Q9BV68 326 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 C19orf24Q9BVV8 132 aa12.38□□□□□ -0.43
PRDM16-203ENST00000378391 GDF9O60383 454 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 ATP5LO75964 103 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 VENTXO95231 258 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 C8orf88P0DMB2 117 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 REG1BP48304 166 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 C10orf128Q5T292 105 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 SPANXN1Q5VSR9 72 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 ZNF818PQ6ZRF7 136 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 GALNT14Q96FL9 552 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 F8VVB4 439 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 F8VWA3 439 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 DLL1O00548 723 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 IGKV3-11P04433 115 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 PGPA6NDG6 321 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 FGF5P12034 268 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 ODAMA1E959 279 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 TGFBR3LH3BV60 316 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 KCNMB1Q16558 191 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 SHISA5Q8N114 240 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 SMIM20Q8N5G0 67 aa12.37□□□□□ -0.43
PRDM16-203ENST00000378391 ZG16O60844 167 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 AMY1AP04745 511 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 CELA2AP08217 269 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 MMD2Q8IY49 270 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 GPHA2Q96T91 129 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 IGFBP3P17936 291 aaPredicted RBP12.36□□□□□ -0.43
PRDM16-203ENST00000378391 C2orf88Q9BSF0 95 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 RPRMQ9NS64 109 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 COL4A4P53420 1690 aaPredicted RBP12.36□□□□□ -0.43
PRDM16-203ENST00000378391 GCSAMLQ5JQS6 135 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 GTF3AQ92664 365 aaKnown RBP12.36□□□□□ -0.43
PRDM16-203ENST00000378391 PLXNB3Q9ULL4 1909 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 OCIAD2Q56VL3 154 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 OR5AN1Q8NGI8 311 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 KBTBD11-OT1A0A1B0GTJ5 212 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 ARL14EPLP0DKL9 152 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 APELAP0DMC3 54 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 PAX2Q02962 417 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 RBPMS2Q6ZRY4 209 aaKnown RBP12.36□□□□□ -0.43
PRDM16-203ENST00000378391 CCL13Q99616 98 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 SS18L2Q9UHA2 77 aa12.36□□□□□ -0.43
PRDM16-203ENST00000378391 PTGDSP41222 190 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 ASPHD2Q6ICH7 369 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 WNT5BQ9H1J7 359 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 TRAV8-1A0A0A6YYK1 113 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 TGFAP01135 160 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 LCN2P80188 198 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 UBE2V1Q13404 147 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 BIVMQ86UB2 503 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 TM2D1Q9BX74 207 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 JPT1Q9UK76 154 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 MOB4Q9Y3A3 225 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 IGHV3-21A0A0B4J1V1 117 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 LOC389332A0A1B0GUA5 103 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 H0YIZ8 118 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 SRIP30626 198 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 FHL1Q13642 323 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 RTP5Q14D33 572 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 ZNF826PQ6ZT77 177 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 LINC00470Q9BZP3 86 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 HS3ST3B1Q9Y662 390 aa12.35□□□□□ -0.43
PRDM16-203ENST00000378391 MGPP08493 103 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 CCL8P80075 99 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 TMEM177Q53S58 311 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 WDR31Q8NA23 367 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 WNT10AQ9GZT5 417 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 TNFRSF19Q9NS68 423 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 TCF19Q9Y242 345 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 SCN5AQ14524 2016 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 A8MWV9 139 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 ADCYAP1P18509 176 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 HOXA5P20719 270 aa12.34□□□□□ -0.43
PRDM16-203ENST00000378391 ACSF3Q4G176 576 aaPredicted RBP12.34□□□□□ -0.43
PRDM16-203ENST00000378391 GAGE13Q4V321 117 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms