RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 IBA57Q5T440 356 aaKnown RBP10□□□□□ -0.81
NPHP4-202ENST00000378161 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 MRPL33O75394 65 aaKnown RBP10□□□□□ -0.81
NPHP4-202ENST00000378161 NAPSAO96009 420 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 SSR4P51571 173 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 SRYQ05066 204 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 IL15RAQ13261 267 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 INO80CQ6PI98 192 aaPredicted RBP10□□□□□ -0.81
NPHP4-202ENST00000378161 CT55Q8WUE5 264 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 TNFRSF18Q9Y5U5 241 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 SYS1-DBNDD2H3BUS1 97 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 UNC119Q13432 240 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 C3AR1Q16581 482 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 LRTM2Q8N967 370 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 TMEM126AQ9H061 195 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.99□□□□□ -0.81
NPHP4-202ENST00000378161 C4orf51C9J302 202 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 MT-CO3P00414 261 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 PPP1CAP62136 330 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 KISS1Q15726 138 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 DMRTC1Q5HYR2 192 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 OR5P3Q8WZ94 311 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 OR2W1Q9Y3N9 320 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 TET1Q8NFU7 2136 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 TRBV20-1A0A075B6N2 111 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 PPYP01298 95 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 GABRG2P18507 467 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 BCL3P20749 454 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 ARTNQ5T4W7 220 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 LINC01590Q5TEZ4 76 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 ABHD17BQ5VST6 288 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 PTCRAQ6ISU1 281 aaPredicted RBP9.99□□□□□ -0.81
NPHP4-202ENST00000378161 LHFPL1Q86WI0 220 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 TMEM171Q8WVE6 324 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 ARPC1AQ92747 370 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 PTH2Q96A98 100 aa9.99□□□□□ -0.81
NPHP4-202ENST00000378161 MSI2Q96DH6 328 aaKnown RBP9.99□□□□□ -0.81
NPHP4-202ENST00000378161 TMEM14DPA8MWL7 114 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 HRKO00198 91 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 VSIRQ9H7M9 311 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 GVINP1Q7Z2Y8 2422 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 ZNF585BQ52M93 769 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 NEGR1Q7Z3B1 354 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 PLA2G2FQ9BZM2 168 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 F2Z2F3 143 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 LMO7DNF2Z398 122 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 RPS16P62249 146 aaKnown RBP9.98□□□□□ -0.81
NPHP4-202ENST00000378161 HAPLN4Q86UW8 402 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 TPRP12270 2363 aaKnown RBP9.98□□□□□ -0.81
NPHP4-202ENST00000378161 GTF3C1Q12789 2109 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 ATP5G3P48201 142 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 SH2D6Q7Z4S9 175 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 AMELYQ99218 206 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 HIST1H4GQ99525 98 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 RAB9BQ9NP90 201 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 TIMM9Q9Y5J7 89 aa9.98□□□□□ -0.81
NPHP4-202ENST00000378161 ZDBF2Q9HCK1 2354 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 A0A1W2PQD3 144 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 DHHO43323 396 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 OCC1Q8TAD7 63 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 C18orf32Q8TCD1 76 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 KCNK17Q96T54 332 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 ZSWIM8A7E2V4 1837 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 LINC01565O15544 149 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 IGKV1D-16P01601 117 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 COL9A1P20849 921 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 SRD5A2P31213 254 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 OR1C1Q15619 314 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 ZADH2Q8N4Q0 377 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 NEUROG1Q92886 237 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 CXCL12P48061 93 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 GUSBP1Q15486 140 aa9.97□□□□□ -0.81
NPHP4-202ENST00000378161 HDHD3Q9BSH5 251 aaPredicted RBP9.97□□□□□ -0.81
NPHP4-202ENST00000378161 RPP25Q9BUL9 199 aaKnown RBP9.97□□□□□ -0.81
NPHP4-202ENST00000378161 PCNTO95613 3336 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 IGHV5-51A0A0C4DH38 117 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 B9A039 149 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 TNFSF11O14788 317 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 GLRXP35754 106 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 FOXA3P55318 350 aaPredicted RBP9.96□□□□□ -0.81
NPHP4-202ENST00000378161 LPAL2Q16609 132 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 SPATA31B1PQ5VZV4 182 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 RHBDD2Q6NTF9 364 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 BCL6BQ8N143 479 aaPredicted RBP9.96□□□□□ -0.81
NPHP4-202ENST00000378161 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.96□□□□□ -0.81
NPHP4-202ENST00000378161 PILRAQ9UKJ1 303 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 FAM186AA6NE01 2351 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 TUSC2O75896 110 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 SMIM10L1P0DMW3 83 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 CDAP32320 146 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 RPS19BP1Q86WX3 136 aaKnown RBP9.96□□□□□ -0.81
NPHP4-202ENST00000378161 GATAD1Q8WUU5 269 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 SMIM10Q96HG1 83 aa9.96□□□□□ -0.81
NPHP4-202ENST00000378161 LIN7CQ9NUP9 197 aaKnown RBP9.96□□□□□ -0.81
NPHP4-202ENST00000378161 CEACAM18A8MTB9 384 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 HSPB6O14558 160 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 ZIC2O95409 532 aaPredicted RBP9.96□□□□□ -0.82
NPHP4-202ENST00000378161 RPL31P62899 125 aaKnown RBP9.96□□□□□ -0.82
NPHP4-202ENST00000378161 FAM166AQ6J272 317 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 PQLC2Q6ZP29 291 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms