RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 PRR32B1ATL7 298 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 PROB1E7EW31 1015 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 GAS1P54826 345 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 TRBV6-7A0A0A0MS04 114 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 C17orf98A8MV24 154 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 IGKV1D-33P01593 117 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 IGKV1-33P01594 117 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 MFAP2P55001 183 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 OR4B1Q8NGF8 309 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 GGACTQ9BVM4 153 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 ELOBQ15370 118 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 OR4A47Q6IF82 309 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 FGFBP3Q8TAT2 258 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 SLC25A33Q9BSK2 321 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 ZNF319Q9P2F9 582 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 YPEL1O60688 119 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 THBDP07204 575 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 YPEL2Q96QA6 119 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 EFNB1P98172 346 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 SMAGPQ0VAQ4 97 aa15.04■□□□□ -0
CLSTN1-202ENST00000377298 IBA57Q5T440 356 aaKnown RBP15.03■□□□□ -0
CLSTN1-202ENST00000377298 ARTNQ5T4W7 220 aa15.03■□□□□ -0
CLSTN1-202ENST00000377298 NABP1Q96AH0 204 aa15.03■□□□□ -0
CLSTN1-202ENST00000377298 TRGV3P03979 118 aa15.03■□□□□ -0
CLSTN1-202ENST00000377298 MPTX1A8MV57 137 aa15.03■□□□□ -0
CLSTN1-202ENST00000377298 UNQ6494/PRO21346Q6UXR6 183 aa15.03■□□□□ -0
CLSTN1-202ENST00000377298 MOSP00540 346 aa15.03■□□□□ -0
CLSTN1-202ENST00000377298 ARL14EPLP0DKL9 152 aa15.03■□□□□ -0
CLSTN1-202ENST00000377298 FAM89BQ8N5H3 189 aa15.03■□□□□ -0
CLSTN1-202ENST00000377298 SPSB4Q96A44 273 aa15.03■□□□□ -0
CLSTN1-202ENST00000377298 MRPL20Q9BYC9 149 aaKnown RBP15.03■□□□□ -0
CLSTN1-202ENST00000377298 IFI27L2Q9H2X8 130 aa15.03■□□□□ -0
CLSTN1-202ENST00000377298 PEAR1Q5VY43 1037 aaPredicted RBP15.02■□□□□ -0
CLSTN1-202ENST00000377298 Q6ZN92 141 aa15.02■□□□□ -0
CLSTN1-202ENST00000377298 Q6ZS92 163 aa15.02■□□□□ -0
CLSTN1-202ENST00000377298 DUX5Q96PT3 197 aa15.02■□□□□ -0
CLSTN1-202ENST00000377298 RTBDNQ9BSG5 229 aaPredicted RBP15.02■□□□□ -0
CLSTN1-202ENST00000377298 A0A0G2JLM5 398 aa15.02■□□□□ -0
CLSTN1-202ENST00000377298 M0R143 59 aa15.02■□□□□ -0
CLSTN1-202ENST00000377298 IL4P05112 153 aa15.02■□□□□ -0
CLSTN1-202ENST00000377298 DANCRP0C864 163 aa15.02■□□□□ -0
CLSTN1-202ENST00000377298 SCGB1C2P0DMR2 95 aa15.02■□□□□ -0
CLSTN1-202ENST00000377298 FAM3BP58499 235 aaPredicted RBP15.02□□□□□ -0.01
CLSTN1-202ENST00000377298 CD81P60033 236 aa15.02□□□□□ -0.01
CLSTN1-202ENST00000377298 SYT8Q8NBV8 401 aa15.02□□□□□ -0.01
CLSTN1-202ENST00000377298 MAP1LC3CQ9BXW4 147 aa15.02□□□□□ -0.01
CLSTN1-202ENST00000377298 MSRB2Q9Y3D2 182 aa15.02□□□□□ -0.01
CLSTN1-202ENST00000377298 FOXG1P55316 489 aaPredicted RBP15.02□□□□□ -0.01
CLSTN1-202ENST00000377298 SLC25A28Q96A46 364 aa15.02□□□□□ -0.01
CLSTN1-202ENST00000377298 MT-ND6P03923 174 aa15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 ZNF497Q6ZNH5 498 aa15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 CCL3L1P16619 93 aa15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 HERVK_113P61574 105 aa15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 PKIAP61925 76 aa15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 MBNL2Q5VZF2 373 aaKnown RBP15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 CYP2G1PQ6ZSU1 146 aa15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 NR2C2APQ86WQ0 139 aa15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 GSX1Q9H4S2 264 aaPredicted RBP15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 LOC105371267A0A1B0GV96 52 aa15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 IGHV1-46P01743 117 aa15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 RPS20P60866 119 aaKnown RBP15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 ELOVL1Q9BW60 279 aa15.01□□□□□ -0.01
CLSTN1-202ENST00000377298 MAS1LP35410 378 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 COL4A6Q14031 1691 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 DOPEY2Q9Y3R5 2298 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 TSPOP30536 169 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 TWIST1Q15672 202 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 IGHG3P01860 377 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 PPP1R27Q86WC6 154 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 TMEM133Q9H2Q1 129 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 HSPB8Q9UJY1 196 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 CGB1A6NKQ9 187 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 JMJD8Q96S16 334 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 SH3BGRL3Q9H299 93 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 FAM181BA6NEQ2 426 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 IGHV3-48P01763 117 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 MYOZ3Q8TDC0 251 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 ARPC1AQ92747 370 aa15□□□□□ -0.01
CLSTN1-202ENST00000377298 TRAV24A0A0B4J272 114 aa14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 ACAA1P09110 424 aaPredicted RBP14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 ZCCHC24Q8N2G6 241 aaKnown RBP14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 OR4X2Q8NGF9 303 aa14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 MBD3L4A6NDZ8 208 aaPredicted RBP14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 MBD3L3A6NE82 208 aaPredicted RBP14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 MBD3L5A6NJ08 208 aaPredicted RBP14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 MBD3L2Q8NHZ7 208 aaPredicted RBP14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 FBXL7Q9UJT9 491 aa14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 DLX6P56179 175 aa14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 SNRPD3P62318 126 aaKnown RBP14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 TUBA4BQ9H853 241 aa14.99□□□□□ -0.01
CLSTN1-202ENST00000377298 SIAH2O43255 324 aa14.98□□□□□ -0.01
CLSTN1-202ENST00000377298 CACNG8Q8WXS5 425 aa14.98□□□□□ -0.01
CLSTN1-202ENST00000377298 AREGP15514 252 aa14.98□□□□□ -0.01
CLSTN1-202ENST00000377298 MORN2Q502X0 79 aa14.98□□□□□ -0.01
CLSTN1-202ENST00000377298 C21orf62Q9NYP8 219 aa14.98□□□□□ -0.01
CLSTN1-202ENST00000377298 SLC25A15Q9Y619 301 aa14.98□□□□□ -0.01
CLSTN1-202ENST00000377298 A0A087WV48 116 aa14.98□□□□□ -0.01
CLSTN1-202ENST00000377298 A8MXK9 166 aa14.98□□□□□ -0.01
CLSTN1-202ENST00000377298 IL6RP08887 468 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms