RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 STAG3L2P0CL84 134 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 STAG3L3P0CL85 134 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 ARG2P78540 354 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 PRAMEF5Q5TYX0 476 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 MDS2Q8NDY4 140 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 TMEM68Q96MH6 324 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 GGTLC1Q9BX51 225 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 MRPL18Q9H0U6 180 aaKnown RBP11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 MSL2Q9HCI7 577 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 PAM16Q9Y3D7 125 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 IQCF6A8MYZ5 107 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 OPRK1P41145 380 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 ACP7Q6ZNF0 438 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 C1orf159Q96HA4 380 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 HSD17B10Q99714 261 aaKnown RBP11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 SEPSECSQ9HD40 501 aaKnown RBP11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 TET2Q6N021 2002 aaPredicted RBP11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 AGFG2O95081 481 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 IRF2P14316 349 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 CRISP2P16562 243 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 RPL31P62899 125 aaKnown RBP11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 MRPL49Q13405 166 aaKnown RBP11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 TMEM249Q2WGJ8 235 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 KRTCAP3Q53RY4 240 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 TPTE2P1Q5T6R2 138 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 GCNT2Q8N0V5 402 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 BTF3L4Q96K17 158 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 NCOR2Q9Y618 2525 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 CXorf1O96002 111 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 DUTP33316 252 aaKnown RBP11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 UBE2NP61088 152 aaKnown RBP11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 OR5I1Q13606 314 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 VN1R17PQ8TDU5 208 aa11.68□□□□□ -0.54
CLCNKA-202ENST00000375692 SPINK4O60575 86 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 IGHV1-2P23083 117 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 IER3P46695 156 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 GPR12P47775 334 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 TPPP2P59282 170 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 SELENOTP62341 195 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 ZNF718Q3SXZ3 478 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 RPL39P5Q59GN2 51 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 WDR82Q6UXN9 313 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 OR1L6Q8NGR2 347 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 SPRR3Q9UBC9 169 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 RNF114Q9Y508 228 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 VDAC2P45880 294 aaPredicted RBP11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 GABRA6Q16445 453 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 BAGE3Q86Y29 109 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 BAGE2Q86Y30 109 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 IL36BQ9NZH7 164 aa11.67□□□□□ -0.54
CLCNKA-202ENST00000375692 PRSS46E5RG02 174 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 M0R1X1 148 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 FCN1O00602 326 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 GCHFRP30047 84 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 BATFQ16520 125 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 TCTEX1D1Q8N7M0 179 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 TMEM208Q9BTX3 173 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 CHD8Q9HCK8 2581 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 ZNF891A8MT65 544 aaPredicted RBP11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 C15orf65H3BRN8 121 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 TNFSF13O75888 250 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 IL6RP08887 468 aaPredicted RBP11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 TNFSF10P50591 281 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 FABP6P51161 128 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 UTF1Q5T230 341 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 CD177Q8N6Q3 437 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 FAM103A1Q9BTL3 118 aaKnown RBP11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 GNG12Q9UBI6 72 aa11.66□□□□□ -0.54
CLCNKA-202ENST00000375692 SVILO95425 2214 aa11.65□□□□□ -0.54
CLCNKA-202ENST00000375692 MPDU1O75352 247 aa11.65□□□□□ -0.54
CLCNKA-202ENST00000375692 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
CLCNKA-202ENST00000375692 PAFAH1B2P68402 229 aa11.65□□□□□ -0.54
CLCNKA-202ENST00000375692 EFNB3Q15768 340 aa11.65□□□□□ -0.54
CLCNKA-202ENST00000375692 TEX43Q6ZNM6 134 aa11.65□□□□□ -0.54
CLCNKA-202ENST00000375692 MIEN1Q9BRT3 115 aa11.65□□□□□ -0.54
CLCNKA-202ENST00000375692 A0A1B0GWJ7 208 aa11.65□□□□□ -0.55
CLCNKA-202ENST00000375692 K7EM74 188 aa11.65□□□□□ -0.55
CLCNKA-202ENST00000375692 SPINT2O43291 252 aa11.65□□□□□ -0.55
CLCNKA-202ENST00000375692 NPSP0C0P6 89 aa11.65□□□□□ -0.55
CLCNKA-202ENST00000375692 ZNF134P52741 427 aa11.65□□□□□ -0.55
CLCNKA-202ENST00000375692 ARSJQ5FYB0 599 aaPredicted RBP11.65□□□□□ -0.55
CLCNKA-202ENST00000375692 SAMD10Q9BYL1 202 aa11.65□□□□□ -0.55
CLCNKA-202ENST00000375692 SNURFLB1AK76 121 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 ACTL6BO94805 426 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 CGAP01215 116 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 RPLP1P05386 114 aaKnown RBP11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 CD46P15529 392 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 LGALS4P56470 323 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 SLC35B1P78383 322 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 RELBQ01201 579 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 C1orf229Q6ZS94 237 aaPredicted RBP11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 OR8I2Q8N0Y5 310 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 WDR31Q8NA23 367 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 OR5AU1Q8NGC0 362 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 OR4P4Q8NGL7 312 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 LEAP2Q969E1 77 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 KLRC4-KLRK1H3BQV0 150 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 MYOD1P15172 320 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms