RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OR1L1Q8NH94 360 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 GALMQ96C23 342 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 STARD4Q96DR4 205 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 C5orf30Q96GV9 206 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 LURAP1Q96LR2 239 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 HARBI1Q96MB7 349 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 TAAR6Q96RI8 345 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 EIF5A2Q9GZV4 153 aaKnown RBP3.92□□□□□ -1.78
USP48-202ENST00000374730 PARP12Q9H0J9 701 aaKnown RBP3.92□□□□□ -1.78
USP48-202ENST00000374730 KCNJ16Q9NPI9 418 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 DCAF16Q9NXF7 216 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 OR14J1Q9UGF5 321 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 MLXQ9UH92 298 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 PPP1R3CQ9UQK1 317 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 RBM7Q9Y580 266 aaKnown RBP3.92□□□□□ -1.78
USP48-202ENST00000374730 TIMM9Q9Y5J7 89 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 SLC25A15Q9Y619 301 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 SVILO95425 2214 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 RAI1Q7Z5J4 1906 aaPredicted RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 MEX3AA1L020 520 aaKnown RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 C7orf77A4D0Y5 90 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 RBFOX3A6NFN3 312 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 SRRM5B3KS81 715 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 H3BP45 60 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 C15orf65H3BRN8 121 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 ITGB1BP1O14713 200 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 WNT9BO14905 357 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 RAB29O14966 203 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 DSCAMO60469 2012 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 ZNF737O75373 536 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 NDUFS6O75380 124 aaKnown RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 WISP2O76076 250 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 CLDN14O95500 239 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 IGHV3-13P01766 116 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 MT-ND4LP03901 98 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 CRYBA1P05813 215 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 SRP19P09132 144 aaKnown RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 VPREB1P12018 145 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 MAS1LP35410 378 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 GLRXP35754 106 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 GABRA2P47869 451 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 CEBPDP49716 269 aaPredicted RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 RAB13P51153 203 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 SERF2P84101 59 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 RUNX1Q01196 453 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 TNFRSF9Q07011 255 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 TMEM267Q0VDI3 215 aaPredicted RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 ATP6V1FQ16864 119 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 LRRC75BQ2VPJ9 315 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 RNF212Q495C1 297 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 AARDQ4LEZ3 155 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 KHDC3LQ587J8 217 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 SOHLH1Q5JUK2 328 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 TIMM23BQ5SRD1 257 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 C1orf185Q5T7R7 199 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 SLC25A24Q6NUK1 477 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 ZNF826PQ6ZT77 177 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 HAPLN4Q86UW8 402 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 ZNF525Q8N782 197 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 NHLRC2Q8NBF2 726 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 CLDND2Q8NHS1 167 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 SCGB1C1Q8TD33 95 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 RXFP4Q8TDU9 374 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 LRRC29Q8WV35 223 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 MBD3L1Q8WWY6 194 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 PINX1Q96BK5 328 aaKnown RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 HSD17B10Q99714 261 aaKnown RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 FAM110AQ9BQ89 295 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 MRPL37Q9BZE1 423 aaKnown RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 OPN3Q9H1Y3 402 aaPredicted RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 OR2D2Q9H210 308 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 NCOR1P1Q9H4R4 102 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 BIN3Q9NQY0 253 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 PSENENQ9NZ42 101 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 JPT1Q9UK76 154 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 RALYQ9UKM9 306 aaKnown RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 PRELID1Q9Y255 219 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 FBXO7Q9Y3I1 522 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 TPRP12270 2363 aaKnown RBP3.91□□□□□ -1.78
USP48-202ENST00000374730 DOCK11Q5JSL3 2073 aa3.91□□□□□ -1.78
USP48-202ENST00000374730 PLCE1Q9P212 2302 aa3.9□□□□□ -1.78
USP48-202ENST00000374730 TET2Q6N021 2002 aaPredicted RBP3.9□□□□□ -1.78
USP48-202ENST00000374730 CADP27708 2225 aa3.9□□□□□ -1.78
USP48-202ENST00000374730 IGLV5-37A0A075B6J1 123 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 IGLV3-9A0A075B6K5 115 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 A0A087WWC5 75 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 ODAMA1E959 279 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 LRRC30A6NM36 301 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 M0R036 132 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 RBFOX2O43251 390 aaKnown RBP eCLIP3.9□□□□□ -1.79
USP48-202ENST00000374730 SPINT2O43291 252 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 S1PR2O95136 353 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 IFNA4P05014 189 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 METTL15P1P0C7V9 234 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 IAPPP10997 89 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 PRDX2P32119 198 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 TIMP3P35625 211 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 HOXA1P49639 335 aaPredicted RBP3.9□□□□□ -1.79
USP48-202ENST00000374730 FABP6P51161 128 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 RAB5BP61020 215 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms