RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SCARF2Q96GP6 870 aaPredicted RBP12.18□□□□□ -0.46
TRAF1-201ENST00000373887 CABIN1Q9Y6J0 2220 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 SVILO95425 2214 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 BSPH1Q075Z2 132 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 LHFPL6Q9Y693 200 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 KIF13BQ9NQT8 1826 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 MARCH11A6NNE9 402 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 NMBP08949 121 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 C2orf88Q9BSF0 95 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 ZNF703Q9H7S9 590 aaPredicted RBP12.18□□□□□ -0.46
TRAF1-201ENST00000373887 TRAV24A0A0B4J272 114 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 CD1AP06126 327 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 SMIM10L1P0DMW3 83 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 FHITP49789 147 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 NPIPB3Q92617 1050 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 SMIM10Q96HG1 83 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 YAE1D1Q9NRH1 226 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 A0A1W2PRX2 142 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 SFTA2Q6UW10 78 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 TDGF1P13385 188 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 CD69Q07108 199 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 MTURNQ8N3F0 131 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 DUX3Q96PT4 197 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 DLL3Q9NYJ7 618 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 PEF1Q9UBV8 284 aaKnown RBP12.17□□□□□ -0.46
TRAF1-201ENST00000373887 PDCD11Q14690 1871 aaKnown RBP12.17□□□□□ -0.46
TRAF1-201ENST00000373887 HBBP68871 147 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 C8orf82Q6P1X6 216 aaPredicted RBP12.17□□□□□ -0.46
TRAF1-201ENST00000373887 APCDD1LQ8NCL9 501 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 NABP2Q9BQ15 211 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 ICAM4Q14773 271 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 SPACA3Q8IXA5 215 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 A0A1B0GV72 72 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 ODAMA1E959 279 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 DMRTA1Q5VZB9 504 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 SCGB3A1Q96QR1 104 aa12.17□□□□□ -0.46
TRAF1-201ENST00000373887 HSPE1P61604 102 aaKnown RBP12.16□□□□□ -0.46
TRAF1-201ENST00000373887 WDR82Q6UXN9 313 aa12.16□□□□□ -0.46
TRAF1-201ENST00000373887 TRAV21A0A0B4J279 112 aa12.16□□□□□ -0.46
TRAF1-201ENST00000373887 CHCHD2Q9Y6H1 151 aaPredicted RBP12.16□□□□□ -0.46
TRAF1-201ENST00000373887 SYNGR3O43761 229 aa12.16□□□□□ -0.46
TRAF1-201ENST00000373887 APOHP02749 345 aaPredicted RBP12.16□□□□□ -0.46
TRAF1-201ENST00000373887 ZNF883P0CG24 379 aa12.16□□□□□ -0.46
TRAF1-201ENST00000373887 GLIPR1P48060 266 aa12.16□□□□□ -0.46
TRAF1-201ENST00000373887 ZNF818PQ6ZRF7 136 aa12.16□□□□□ -0.46
TRAF1-201ENST00000373887 GPR132Q9UNW8 380 aa12.16□□□□□ -0.46
TRAF1-201ENST00000373887 NPIPB11E5RHQ5 1161 aa12.16□□□□□ -0.46
TRAF1-201ENST00000373887 RNASE4P34096 147 aaKnown RBP12.16□□□□□ -0.46
TRAF1-201ENST00000373887 PLSCR2Q9NRY7 297 aa12.16□□□□□ -0.46
TRAF1-201ENST00000373887 DPRXA6NFQ7 191 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 PROB1E7EW31 1015 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 ZXDCQ2QGD7 858 aaPredicted RBP12.15□□□□□ -0.46
TRAF1-201ENST00000373887 IMMP2LQ96T52 175 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 TMEM106BQ9NUM4 274 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 ELOVL5Q9NYP7 299 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 IGHV3OR16-8A0A075B7F1 116 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 NPIPB8E9PQR5 432 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 TRGV3P03979 118 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 GGACTQ9BVM4 153 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 HLA-DQB1P01920 261 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 LTBP1Q14766 1721 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 GCHFRP30047 84 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
TRAF1-201ENST00000373887 LIMS1P48059 325 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 CRYBA2P53672 197 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 CFAP161Q6P656 301 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 ZNRF1Q8ND25 227 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 ABCA7Q8IZY2 2146 aa12.15□□□□□ -0.46
TRAF1-201ENST00000373887 HOXA5P20719 270 aa12.15□□□□□ -0.47
TRAF1-201ENST00000373887 PAPPA-AS1Q5QFB9 102 aa12.15□□□□□ -0.47
TRAF1-201ENST00000373887 RBMY1BA6NDE4 496 aaKnown RBP12.14□□□□□ -0.47
TRAF1-201ENST00000373887 RBMY1EA6NEQ0 496 aaKnown RBP12.14□□□□□ -0.47
TRAF1-201ENST00000373887 SLC17A3O00476 420 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 RBMY1DP0C7P1 496 aaKnown RBP12.14□□□□□ -0.47
TRAF1-201ENST00000373887 RBMY1A1P0DJD3 496 aaKnown RBP12.14□□□□□ -0.47
TRAF1-201ENST00000373887 RBMY1CP0DJD4 496 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 ASIPP42127 132 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 TXNDC17Q9BRA2 123 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 CNTFRP26992 372 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 IGLV1-36A0A0B4J1U3 117 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 FAM57AQ8TBR7 257 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 ALX4Q9H161 411 aaPredicted RBP12.14□□□□□ -0.47
TRAF1-201ENST00000373887 TCF19Q9Y242 345 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 IGKV1D-42A0A075B6H8 117 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 TGFBR3LH3BV60 316 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 RPL39P5Q59GN2 51 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 TTC9CQ8N5M4 171 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 AICDAQ9GZX7 198 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 NPIPB9F8W1W9 429 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 NPIPB7O75200 414 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 CFDP00746 253 aaPredicted RBP12.14□□□□□ -0.47
TRAF1-201ENST00000373887 UMODP07911 640 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 MESP1Q9BRJ9 268 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 SCN5AQ14524 2016 aa12.14□□□□□ -0.47
TRAF1-201ENST00000373887 PIKFYVEQ9Y2I7 2098 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 FSTP19883 344 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 MALP21145 153 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 C1orf174Q8IYL3 243 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 CITED2Q99967 270 aaPredicted RBP12.13□□□□□ -0.47
TRAF1-201ENST00000373887 FAM206AQ9NX38 181 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms