RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TDGF1P13385 188 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 COX5AP20674 150 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 CD27P26842 260 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 EPHA8P29322 1005 aaPredicted RBP4.5□□□□□ -1.69
ATG4A-204ENST00000372246 SRIP30626 198 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 KIR2DS4P43632 304 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 NXPH1P58417 271 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 B3GALT5-AS1P59052 145 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 KIR2DS1Q14954 304 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 CEACAM21Q3KPI0 293 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 Q56UQ5 140 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 COL5A1-AS1Q5SY13 56 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 SPINK14Q6IE38 97 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 FAM58AQ8N1B3 248 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 SIGLECL1Q8N7X8 197 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 OR2D3Q8NGH3 330 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 OR10G8Q8NGN5 311 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 GMPPAQ96IJ6 420 aaPredicted RBP4.5□□□□□ -1.69
ATG4A-204ENST00000372246 PMCHL2Q9BQD1 86 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 C20orf144Q9BQM9 153 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 PHF7Q9BWX1 381 aaPredicted RBP4.5□□□□□ -1.69
ATG4A-204ENST00000372246 STRADBQ9C0K7 418 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 CLEC5AQ9NY25 188 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 ZFP30Q9Y2G7 519 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 LAMTOR2Q9Y2Q5 125 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 IGHV5-10-1A0A0J9YXX1 117 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 A0A1W2PPV4 95 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 LRRC30A6NM36 301 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 C15orf62A8K5M9 175 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 MT-CO3P00414 261 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 GPX1P07203 203 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 CYC1P08574 325 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 IGLC2P0DOY2 106 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 IGLC3P0DOY3 106 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 GLB1P16278 677 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 CRYBB3P26998 211 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 HNRNPA3P51991 378 aaKnown RBP4.5□□□□□ -1.69
ATG4A-204ENST00000372246 SELENOVP59797 346 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 PEAR1Q5VY43 1037 aaPredicted RBP4.5□□□□□ -1.69
ATG4A-204ENST00000372246 LINC00173Q6ZV60 143 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 CPT1CQ8TCG5 803 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 CORO2AQ92828 525 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 C10orf35Q96D05 121 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 C1orf159Q96HA4 380 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 LOXL4Q96JB6 756 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF479Q96JC4 524 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 NAA38Q9BRA0 125 aaKnown RBP4.5□□□□□ -1.69
ATG4A-204ENST00000372246 TMEM147Q9BVK8 224 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 C1QTNF5Q9BXJ0 243 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 HIPK2Q9H2X6 1198 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 MS4A5Q9H3V2 200 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 SERTAD4Q9NUC0 356 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 COL5A1P20908 1838 aaPredicted RBP4.5□□□□□ -1.69
ATG4A-204ENST00000372246 ASH1LQ9NR48 2969 aaKnown RBP4.5□□□□□ -1.69
ATG4A-204ENST00000372246 IGLV3-12A0A075B6K2 115 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF253O75346 499 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 NBEAP1P0C6P0 100 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 CTRLP40313 264 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 DSCR4P56555 118 aaPredicted RBP4.49□□□□□ -1.69
ATG4A-204ENST00000372246 SUMO1P63165 101 aaKnown RBP4.49□□□□□ -1.69
ATG4A-204ENST00000372246 Q0VFX4 171 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 TRIP6Q15654 476 aaKnown RBP4.49□□□□□ -1.69
ATG4A-204ENST00000372246 Q6P435 159 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 PQLC2Q6ZP29 291 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 Q71RC1 249 aaPredicted RBP4.49□□□□□ -1.69
ATG4A-204ENST00000372246 NIT1Q86X76 327 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 MMD2Q8IY49 270 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 OR4P4Q8NGL7 312 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 Q8TCH9 128 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 MGST2Q99735 147 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 SPXQ9BT56 116 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 HINT2Q9BX68 163 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 CLEC7AQ9BXN2 247 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 RARRES3Q9UL19 164 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 PSG11Q9UQ72 335 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 WIPI2Q9Y4P8 454 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 C12orf77C9JDV5 145 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 PROP1O75360 226 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 NEURL1O76050 574 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 SYNGR4O95473 234 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 MGST1P10620 155 aaKnown RBP4.49□□□□□ -1.69
ATG4A-204ENST00000372246 GDF1P27539 372 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 CD1BP29016 333 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 LCN2P80188 198 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 SLAQ13239 276 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 EDDM3AQ14507 147 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 KRTAP27-1Q3LI81 207 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 ACSF3Q4G176 576 aaPredicted RBP4.49□□□□□ -1.69
ATG4A-204ENST00000372246 RPL39P5Q59GN2 51 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF841Q6ZN19 808 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 MIR17HGQ75NE6 70 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 C1orf174Q8IYL3 243 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF48Q96MX3 618 aaPredicted RBP4.49□□□□□ -1.69
ATG4A-204ENST00000372246 ASCL2Q99929 193 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 ALKBH7Q9BT30 221 aaPredicted RBP4.49□□□□□ -1.69
ATG4A-204ENST00000372246 GCM1Q9NP62 436 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 ZNRD1Q9P1U0 126 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 HSPB7Q9UBY9 170 aa4.49□□□□□ -1.69
ATG4A-204ENST00000372246 TNCP24821 2201 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 IGHV1-45A0A0A0MS14 117 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms