RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 BATF2Q8N1L9 274 aa9.5□□□□□ -0.89
TSPAN1-201ENST00000372003 POM121L2Q96KW2 1035 aa9.5□□□□□ -0.89
TSPAN1-201ENST00000372003 MIEN1Q9BRT3 115 aa9.5□□□□□ -0.89
TSPAN1-201ENST00000372003 TRAPPC2LQ9UL33 140 aa9.5□□□□□ -0.89
TSPAN1-201ENST00000372003 KCNS2Q9ULS6 477 aa9.5□□□□□ -0.89
TSPAN1-201ENST00000372003 POLDIP2Q9Y2S7 368 aa9.5□□□□□ -0.89
TSPAN1-201ENST00000372003 LY96Q9Y6Y9 160 aa9.5□□□□□ -0.89
TSPAN1-201ENST00000372003 IGHV1-18A0A0C4DH31 117 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 MDFIC2A0A1B0GVS7 189 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 A6NNC1 897 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 DEFB108AA8MXU0 73 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 DLEU1O43261 78 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 KRASP01116 189 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 CCL2P13500 99 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 PLP2Q04941 152 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 BSPH1Q075Z2 132 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 SSX8Q7RTT4 187 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 MYPOPQ86VE0 399 aaPredicted RBP9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 CMTM2Q8TAZ6 248 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 FAM216AQ8WUB2 273 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 IL1F10Q8WWZ1 152 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 TMEM106BQ9NUM4 274 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 WDR83OSQ9Y284 106 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 HCFC1P51610 2035 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 TRBV9A0A0B4J1U6 114 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 MARCH11A6NNE9 402 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 YPEL1O60688 119 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 LILRA1O75019 489 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 IGKV3-15P01624 115 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 CECR9P0C854 216 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 ZNF16P17020 682 aaPredicted RBP9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 CCNOP22674 350 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 NPPCP23582 126 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 CD40P25942 277 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 ERVK11-1P61568 191 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 GNB1P62873 340 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 RPP30P78346 268 aaKnown RBP9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 ZNF146Q15072 292 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 COX19Q49B96 90 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 TMEM108Q6UXF1 575 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 DTD1Q8TEA8 209 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 SFRP2Q96HF1 295 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 YPEL2Q96QA6 119 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 RTL8AQ9BWD3 113 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 CBLN4Q9NTU7 201 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 CBY1Q9Y3M2 126 aa9.49□□□□□ -0.89
TSPAN1-201ENST00000372003 USP9YO00507 2555 aaPredicted RBP9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 SPTAN1Q13813 2472 aaKnown RBP9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 ODAMA1E959 279 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 FAM90A9PA6NNJ1 464 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 HPRT1P00492 218 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 PLAUP00749 431 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 CD3EP07766 207 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 RAC2P15153 192 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 CHRNA7P36544 502 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 OR3A1P47881 315 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 RPL19P84098 196 aaKnown RBP9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 Q0VG73 95 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 TMEM183BQ1AE95 376 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 AARDQ4LEZ3 155 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 TBX15Q96SF7 602 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 OR51B6Q9H340 312 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 ICE1Q9Y2F5 2266 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 DOPEY2Q9Y3R5 2298 aa9.48□□□□□ -0.89
TSPAN1-201ENST00000372003 ZNF705FA8MVS1 300 aaPredicted RBP9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 SH2D1BO14796 132 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 MMP23AO75900 390 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 OR2H2O95918 312 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 IGLV1-44P01699 117 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 CRYAAP02489 173 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 ZNF705DP0CH99 300 aaPredicted RBP9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 ZNF705BP0CI00 300 aaPredicted RBP9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 ZNF25P17030 456 aaPredicted RBP9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 KITLGP21583 273 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 OPRK1P41145 380 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 FAM169BQ8N8A8 192 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 GATAD1Q8WUU5 269 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 NEUROG1Q92886 237 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 GOLT1BQ9Y3E0 138 aa9.47□□□□□ -0.89
TSPAN1-201ENST00000372003 A0A1W2PPV4 95 aa9.46□□□□□ -0.89
TSPAN1-201ENST00000372003 LOXP28300 417 aaPredicted RBP9.46□□□□□ -0.89
TSPAN1-201ENST00000372003 KIAA2026Q5HYC2 2103 aa9.46□□□□□ -0.89
TSPAN1-201ENST00000372003 Q8N7P7 452 aa9.46□□□□□ -0.89
TSPAN1-201ENST00000372003 OR10G8Q8NGN5 311 aa9.46□□□□□ -0.89
TSPAN1-201ENST00000372003 SGMS2Q8NHU3 365 aa9.46□□□□□ -0.89
TSPAN1-201ENST00000372003 ATG101Q9BSB4 218 aa9.46□□□□□ -0.89
TSPAN1-201ENST00000372003 IL36BQ9NZH7 164 aa9.46□□□□□ -0.89
TSPAN1-201ENST00000372003 CLN8Q9UBY8 286 aa9.46□□□□□ -0.89
TSPAN1-201ENST00000372003 ARL2-SNX15V9GYD0 113 aa9.46□□□□□ -0.89
TSPAN1-201ENST00000372003 RTTNQ86VV8 2226 aa9.46□□□□□ -0.9
TSPAN1-201ENST00000372003 IGHV2OR16-5A0A0B4J2B6 119 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 TMEM30CPA0ZSE6 113 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 C9JCJ5 164 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 CXorf1O96002 111 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 CD1BP29016 333 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 GCH1P30793 250 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 CLEC12BQ2HXU8 276 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 TBC1D28Q2M2D7 210 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 C3orf36Q3SXR2 165 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 TPTE2P1Q5T6R2 138 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms