RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 DUX5Q96PT3 197 aa16.58■□□□□ 0.24
LMO4-202ENST00000370544 IGHV3-35A0A0C4DH35 117 aa16.58■□□□□ 0.24
LMO4-202ENST00000370544 GPX1P07203 203 aa16.58■□□□□ 0.24
LMO4-202ENST00000370544 GOLT1AQ6ZVE7 132 aa16.58■□□□□ 0.24
LMO4-202ENST00000370544 OR1P1Q8NH06 330 aa16.58■□□□□ 0.24
LMO4-202ENST00000370544 ZNF502Q8TBZ5 544 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 LYZL4Q96KX0 146 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 IGKV1D-33P01593 117 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 IGKV1-33P01594 117 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 PINLYPA6NC86 204 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 NPIPB6E9PJ23 425 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 NPIPB7O75200 414 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 PLPPR1Q8TBJ4 325 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 MESP1Q9BRJ9 268 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 ATG101Q9BSB4 218 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 GGACTQ9BVM4 153 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 LINC00312Q9Y6C7 94 aa16.57■□□□□ 0.24
LMO4-202ENST00000370544 CIDEAO60543 219 aa16.56■□□□□ 0.24
LMO4-202ENST00000370544 TRGV3P03979 118 aa16.56■□□□□ 0.24
LMO4-202ENST00000370544 MSGN1A6NI15 193 aa16.56■□□□□ 0.24
LMO4-202ENST00000370544 UBE2L6O14933 153 aa16.56■□□□□ 0.24
LMO4-202ENST00000370544 DNAJC13O75165 2243 aa16.56■□□□□ 0.24
LMO4-202ENST00000370544 CEP290O15078 2479 aa16.56■□□□□ 0.24
LMO4-202ENST00000370544 C2orf83Q53S99 150 aa16.56■□□□□ 0.24
LMO4-202ENST00000370544 SFRP2Q96HF1 295 aa16.56■□□□□ 0.24
LMO4-202ENST00000370544 MRPL20Q9BYC9 149 aaKnown RBP16.56■□□□□ 0.24
LMO4-202ENST00000370544 MAP1LC3AQ9H492 121 aa16.56■□□□□ 0.24
LMO4-202ENST00000370544 ZNF362Q5T0B9 420 aaPredicted RBP16.56■□□□□ 0.24
LMO4-202ENST00000370544 IGHV3-23P01764 117 aa16.56■□□□□ 0.24
LMO4-202ENST00000370544 RPLP1P05386 114 aaKnown RBP16.56■□□□□ 0.24
LMO4-202ENST00000370544 CCL1P22362 96 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 NR2C2APQ86WQ0 139 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 NEU1Q99519 415 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 SPRR3Q9UBC9 169 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 SMAD7O15105 426 aaKnown RBP16.55■□□□□ 0.24
LMO4-202ENST00000370544 CD59P13987 128 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 TSPOP30536 169 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 RCC1LQ96I51 464 aaKnown RBP16.55■□□□□ 0.24
LMO4-202ENST00000370544 RPRMQ9NS64 109 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 ZNF506Q5JVG8 444 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 AMMECR1LQ6DCA0 310 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 TRPM7Q96QT4 1865 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 SIAH2O43255 324 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 TFF3Q07654 80 aa16.55■□□□□ 0.24
LMO4-202ENST00000370544 CENPWQ5EE01 88 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 ELOVL1Q9BW60 279 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 GREB1Q4ZG55 1949 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 PRR32B1ATL7 298 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 RAXQ9Y2V3 346 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 A0A087WV48 116 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 NUDT3O95989 172 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 SNRPD3P62318 126 aaKnown RBP16.54■□□□□ 0.24
LMO4-202ENST00000370544 RPL24P83731 157 aaKnown RBP16.54■□□□□ 0.24
LMO4-202ENST00000370544 FAM168AQ92567 244 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 A1L4Q6 167 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 ZNF324O75467 553 aaPredicted RBP16.54■□□□□ 0.24
LMO4-202ENST00000370544 IGFBP2P18065 325 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 C19orf54Q5BKX5 351 aa16.54■□□□□ 0.24
LMO4-202ENST00000370544 RNASE6Q93091 150 aaKnown RBP16.54■□□□□ 0.24
LMO4-202ENST00000370544 TRIOBPQ9H2D6 2365 aa16.53■□□□□ 0.24
LMO4-202ENST00000370544 SRIP30626 198 aa16.53■□□□□ 0.24
LMO4-202ENST00000370544 J3QRE1 110 aa16.53■□□□□ 0.24
LMO4-202ENST00000370544 LEPROTL1O95214 131 aa16.53■□□□□ 0.24
LMO4-202ENST00000370544 IGHV3OR16-13A0A075B7E8 117 aa16.53■□□□□ 0.24
LMO4-202ENST00000370544 TRBV6-7A0A0A0MS04 114 aa16.53■□□□□ 0.24
LMO4-202ENST00000370544 IGHV3-74A0A0B4J1X5 117 aa16.53■□□□□ 0.24
LMO4-202ENST00000370544 IGKV1-9A0A0C4DH69 117 aa16.53■□□□□ 0.24
LMO4-202ENST00000370544 DLX6P56179 175 aa16.53■□□□□ 0.24
LMO4-202ENST00000370544 S4R3C0 116 aa16.53■□□□□ 0.24
LMO4-202ENST00000370544 FOXI3A8MTJ6 420 aaPredicted RBP16.52■□□□□ 0.24
LMO4-202ENST00000370544 TMEM250H0YL14 139 aa16.52■□□□□ 0.24
LMO4-202ENST00000370544 FBXL7Q9UJT9 491 aa16.52■□□□□ 0.24
LMO4-202ENST00000370544 EGR1P18146 543 aa16.52■□□□□ 0.24
LMO4-202ENST00000370544 MPTX1A8MV57 137 aa16.52■□□□□ 0.24
LMO4-202ENST00000370544 HIST1H1AQ02539 215 aaPredicted RBP16.52■□□□□ 0.24
LMO4-202ENST00000370544 HIST1H2BAQ96A08 127 aa16.52■□□□□ 0.24
LMO4-202ENST00000370544 SLC25A28Q96A46 364 aa16.52■□□□□ 0.24
LMO4-202ENST00000370544 FOXA2Q9Y261 457 aaPredicted RBP16.52■□□□□ 0.24
LMO4-202ENST00000370544 TPRP12270 2363 aaKnown RBP16.52■□□□□ 0.23
LMO4-202ENST00000370544 HERPUD1Q15011 391 aa16.52■□□□□ 0.23
LMO4-202ENST00000370544 ARPC1AQ92747 370 aa16.52■□□□□ 0.23
LMO4-202ENST00000370544 GPR82Q96P67 336 aa16.52■□□□□ 0.23
LMO4-202ENST00000370544 SEMA5BQ9P283 1151 aa16.52■□□□□ 0.23
LMO4-202ENST00000370544 FBLN5Q9UBX5 448 aa16.52■□□□□ 0.23
LMO4-202ENST00000370544 AHCTF1Q8WYP5 2266 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 ZNF98A6NK75 572 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 SPTBP11277 2137 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 CA7P43166 264 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 ICAM4Q14773 271 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 SPATA45Q537H7 98 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 PPP1R27Q86WC6 154 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 CLDND2Q8NHS1 167 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 SAPCD1Q5SSQ6 148 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 WDR82Q6UXN9 313 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 TRBV9A0A0B4J1U6 114 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 ZNF25P17030 456 aaPredicted RBP16.51■□□□□ 0.23
LMO4-202ENST00000370544 SVILO95425 2214 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 MIEN1Q9BRT3 115 aa16.51■□□□□ 0.23
LMO4-202ENST00000370544 TRGC1P0CF51 173 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 DOCK4Q8N1I0 1966 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms