RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 HLA-AP01891 365 aaKnown RBP12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 EGR2P11161 476 aaPredicted RBP12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 RAB25P57735 213 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 C4orf46Q504U0 113 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 TMEM268Q5VZI3 342 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 COMMD1Q8N668 190 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 LRTM2Q8N967 370 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 GRPEL2Q8TAA5 225 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 LHFPL5Q8TAF8 219 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 SPIN2AQ99865 258 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 SPIN2BQ9BPZ2 258 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 A0A0B4J2A0 478 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 DUXBA0A1W2PPF3 345 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 C9orf170A2RU37 121 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 H2AFB2P0C5Z0 115 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 ANXA7P20073 488 aaKnown RBP12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 CFHR3Q02985 330 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 NRARPQ7Z6K4 114 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 OR4X2Q8NGF9 303 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 SPATA3Q8NHX4 192 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 RNASE11Q8TAA1 199 aaKnown RBP12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 LSM10Q969L4 123 aaKnown RBP12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 SHPKQ9UHJ6 478 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 LINC00527Q9UJ94 153 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 FBXO7Q9Y3I1 522 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 TRAV6A0A075B6T7 132 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 TRAV3A0A0B4J244 114 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 MSGN1A6NI15 193 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 C15orf61A6NNL5 157 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 DUS4LO95620 317 aaKnown RBP12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 OR9G9P0C7N8 305 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 P0C879 139 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 PPIFP30405 207 aaKnown RBP12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 RPL27AP46776 148 aaKnown RBP12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 DHRS2Q13268 280 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 C19orf54Q5BKX5 351 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 TEX38Q6PEX7 206 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 PLET1Q6UQ28 207 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 LYG2Q86SG7 212 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 SLC35G3Q8N808 338 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 MINDY2Q8NBR6 621 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 LFNGQ8NES3 379 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 OR5AU1Q8NGC0 362 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 OR5B3Q8NH48 314 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 OR4A16Q8NH70 328 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 PHB2Q99623 299 aa12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 SRSF8Q9BRL6 282 aaKnown RBP12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 FAM103A1Q9BTL3 118 aaKnown RBP12.21□□□□□ -0.46
PRPF38B-202ENST00000370022 IGHG4P01861 327 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 ECSCRQ19T08 205 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 UNQ5815/PRO19632Q6UWF5 114 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 SHISA2Q6UWI4 295 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 ZNF429Q86V71 674 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 OR5M8Q8NGP6 311 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 COQ8AQ8NI60 647 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 CASTOR1Q8WTX7 329 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 CITED1Q99966 193 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 TMEM14BQ9NUH8 114 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 FOXA2Q9Y261 457 aaPredicted RBP12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 ZNF257Q9Y2Q1 563 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 WSB1Q9Y6I7 421 aa12.2□□□□□ -0.46
PRPF38B-202ENST00000370022 G3V318 75 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 FBXO24O75426 580 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 PTTG1O95997 202 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 ELANEP08246 267 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 OR2B8PP59922 312 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 ANKRD55Q3KP44 614 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 HSD17B13Q7Z5P4 300 aaPredicted RBP12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 ZNF329Q86UD4 541 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 OR1L8Q8NGR8 309 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 CACFD1Q9UGQ2 172 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 OR51B2Q9Y5P1 312 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 COL6A5A8TX70 2615 aa12.19□□□□□ -0.46
PRPF38B-202ENST00000370022 A0A1W2PN81 502 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 RBMXL2O75526 392 aaKnown RBP12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 CHRNA7P36544 502 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 FOXE3Q13461 319 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 C10orf55Q5SWW7 151 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 MARVELD1Q9BSK0 173 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 QTRT1Q9BXR0 403 aaKnown RBP12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 PRR13Q9NZ81 148 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 NSG2Q9Y328 171 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 TMED3Q9Y3Q3 217 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 A0A0B4J293 547 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 TEX50A0A1B0GTY4 177 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 TEX22C9J3V5 150 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 H3BUA1 57 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 IGLV1-40P01703 118 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 TRAPPC2P0DI81 140 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 TRAPPC2BP0DI82 140 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 KRTAP10-3P60369 221 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 NMSQ5H8A3 153 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 LYZL2Q7Z4W2 148 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 RNF152Q8N8N0 203 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 MITD1Q8WV92 249 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 FYTTD1Q96QD9 318 aaKnown RBP12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 PDCD10Q9BUL8 212 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 NDUFA4L2Q9NRX3 87 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms