RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 TNFRSF18Q9Y5U5 241 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 A0A0G2JLM5 398 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 CACNG7P62955 275 aa15.21■□□□□ 0.02
SNX27-203ENST00000368843 ZNF385CQ66K41 422 aaPredicted RBP15.21■□□□□ 0.02
SNX27-203ENST00000368843 MRPL32Q9BYC8 188 aaKnown RBP15.21■□□□□ 0.02
SNX27-203ENST00000368843 ALX4Q9H161 411 aaPredicted RBP15.21■□□□□ 0.02
SNX27-203ENST00000368843 EGR1P18146 543 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 ICAM4Q14773 271 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 C10orf128Q5T292 105 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 SPSB4Q96A44 273 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 TRBV20OR9-2A0A075B6H5 130 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 APCDD1LQ8NCL9 501 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 CLDND2Q8NHS1 167 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 CTHRC1Q96CG8 243 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 IGHV3-11P01762 117 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 DOCK3Q8IZD9 2030 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 CELA3BP08861 270 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 NSUN5P1Q3KNT7 163 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 C1orf100Q5SVJ3 147 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 OR4D5Q8NGN0 318 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 KNTC1P50748 2209 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 EFEMP2O95967 443 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 C5orf66Q9H5L9 145 aa15.2■□□□□ 0.02
SNX27-203ENST00000368843 M0QZK8 103 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 M0R381 172 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 GGCTO75223 188 aaKnown RBP15.19■□□□□ 0.02
SNX27-203ENST00000368843 FAM131CQ96AQ9 280 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 C18orf15Q96N68 181 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 LEPROTL1O95214 131 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 MRPS16Q9Y3D3 137 aaKnown RBP15.19■□□□□ 0.02
SNX27-203ENST00000368843 MDC1Q14676 2089 aaKnown RBP15.19■□□□□ 0.02
SNX27-203ENST00000368843 PROB1E7EW31 1015 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 RTN4RL2Q86UN3 420 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 NRXN2Q9P2S2 1712 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 TCF24Q7RTU0 167 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 C9orf106Q8NAJ2 232 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 PEMTQ9UBM1 199 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 EGR4Q05215 589 aa15.19■□□□□ 0.02
SNX27-203ENST00000368843 LBHQ53QV2 105 aaPredicted RBP15.19■□□□□ 0.02
SNX27-203ENST00000368843 GAGE10A6NGK3 116 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 PLP1P60201 277 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 CYB5R2Q6BCY4 276 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 ERASQ7Z444 233 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 TM4SF5O14894 197 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 C1orf162Q8NEQ5 155 aaPredicted RBP15.18■□□□□ 0.02
SNX27-203ENST00000368843 RNASE6Q93091 150 aaKnown RBP15.18■□□□□ 0.02
SNX27-203ENST00000368843 TSPAN13O95857 204 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 MT-ND6P03923 174 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 RPS11P62280 158 aaKnown RBP eCLIP15.18■□□□□ 0.02
SNX27-203ENST00000368843 BIVMQ86UB2 503 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 ALKBH7Q9BT30 221 aaPredicted RBP15.18■□□□□ 0.02
SNX27-203ENST00000368843 COL25A1Q9BXS0 654 aaPredicted RBP15.18■□□□□ 0.02
SNX27-203ENST00000368843 IGLV3-21P80748 117 aaPredicted RBP15.18■□□□□ 0.02
SNX27-203ENST00000368843 TMEM187Q14656 261 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 TMEM160Q9NX00 188 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 SMIM8Q96KF7 97 aa15.18■□□□□ 0.02
SNX27-203ENST00000368843 RRHO14718 337 aa15.17■□□□□ 0.02
SNX27-203ENST00000368843 HLA-DQA1P01909 254 aa15.17■□□□□ 0.02
SNX27-203ENST00000368843 ADAMTS7Q9UKP4 1686 aa15.17■□□□□ 0.02
SNX27-203ENST00000368843 GCM2O75603 506 aaPredicted RBP15.17■□□□□ 0.02
SNX27-203ENST00000368843 ASIPP42127 132 aa15.17■□□□□ 0.02
SNX27-203ENST00000368843 STHQ8IWL8 128 aa15.17■□□□□ 0.02
SNX27-203ENST00000368843 WDYHV1Q96HA8 205 aa15.17■□□□□ 0.02
SNX27-203ENST00000368843 IFI6P09912 130 aa15.17■□□□□ 0.02
SNX27-203ENST00000368843 ZNF708P17019 499 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 WDR82Q6UXN9 313 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 TEX45Q8NA69 505 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 ARID2Q68CP9 1835 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 ZNF236Q9UL36 1845 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 TRGV2A0A075B6R0 118 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 SLC25A38Q96DW6 304 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 TXNDC17Q9BRA2 123 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 GP6Q9HCN6 339 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 WFDC12Q8WWY7 111 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 ST6GALNAC6Q969X2 333 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 SMDT1Q9H4I9 107 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 RP1L1Q8IWN7 2480 aaPredicted RBP15.16■□□□□ 0.02
SNX27-203ENST00000368843 SRIP30626 198 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 C2orf88Q9BSF0 95 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 C11orf44Q8N8P7 122 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 C19orf24Q9BVV8 132 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 CHD5Q8TDI0 1954 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 ZIC4Q8N9L1 334 aa15.16■□□□□ 0.02
SNX27-203ENST00000368843 MRPL20Q9BYC9 149 aaKnown RBP15.16■□□□□ 0.02
SNX27-203ENST00000368843 FHITP49789 147 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 SEMA5BQ9P283 1151 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 OR10AG1Q8NH19 301 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 CBLN4Q9NTU7 201 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 DNAJC13O75165 2243 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 LOC390937A0A1W2PQ73 354 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 FABP2P12104 132 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 GCHFRP30047 84 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 PPP1R3EQ9H7J1 279 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 IL6RP08887 468 aaPredicted RBP15.15■□□□□ 0.02
SNX27-203ENST00000368843 DPH3P1Q9H4G8 78 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 BRCA1P38398 1863 aaKnown RBP15.15■□□□□ 0.02
SNX27-203ENST00000368843 GLMPQ8WWB7 406 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 JMJD8Q96S16 334 aa15.15■□□□□ 0.02
SNX27-203ENST00000368843 TCRBV4S1A1TA0A5B7 111 aa15.14■□□□□ 0.01
SNX27-203ENST00000368843 J3QW42 95 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms