RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 FAM110DQ8TAY7 271 aaPredicted RBP11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 TMEM230Q96A57 120 aa11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 RHOVQ96L33 236 aa11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 ALX4Q9H161 411 aaPredicted RBP11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 SLC2A9Q9NRM0 540 aa11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 CMYA5Q8N3K9 4069 aa11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 A0A1W2PN81 502 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 C9orf170A2RU37 121 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 GOSR2O14653 212 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 CNIH1O95406 144 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 HPRT1P00492 218 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 OPN1MWP04001 364 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 SULT1A3P0DMM9 295 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 SULT1A4P0DMN0 295 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 OPN1MW2P0DN77 364 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 OPN1MW3P0DN78 364 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 F2RP25116 425 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 PSMB8P28062 276 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 CHRNA7P36544 502 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 TNXAQ16473 311 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 ZNF585BQ52M93 769 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 LYG2Q86SG7 212 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 PPP1R14BQ96C90 147 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 KLK15Q9H2R5 256 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 KBTBD11O94819 623 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 IGLV1-40P01703 118 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 RPA2P15927 270 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 TAS2R31P59538 309 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 FOXE3Q13461 319 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 ASPHD1Q5U4P2 390 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 UNQ5815/PRO19632Q6UWF5 114 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 C12orf45Q8N5I9 185 aaPredicted RBP11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 RNF152Q8N8N0 203 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 R3HDM4Q96D70 268 aa11.78□□□□□ -0.52
SMPDL3A-201ENST00000368440 TEX13DA0A0J9YY54 714 aaPredicted RBP11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR2A4O95047 310 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 HRASP01112 189 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 ELANEP08246 267 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 APELAP0DMC3 54 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 LPAR6P43657 344 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 PIGPP57054 158 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 SURF2Q15527 256 aaPredicted RBP11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 TMEM128Q5BJH2 165 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR4A47Q6IF82 309 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 TMEM167AQ8TBQ9 72 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 ZFAND1Q8TCF1 268 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR2A7Q96R45 310 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 PLEKHA2Q9HB19 425 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 TNCP24821 2201 aa11.77□□□□□ -0.53
SMPDL3A-201ENST00000368440 TRAV3A0A0B4J244 114 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 CCSO14618 274 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 CTSDP07339 412 aaPredicted RBP11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 MYOD1P15172 320 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 ECI1P42126 302 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 RND3P61587 244 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 ZFP69Q49AA0 526 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 AKIRIN2Q53H80 203 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 MMD2Q8IY49 270 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 CD300LFQ8TDQ1 290 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 SRSF12Q8WXF0 261 aaKnown RBP11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 WDR89Q96FK6 387 aaPredicted RBP11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 ZNF486Q96H40 463 aaPredicted RBP11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 FOXA2Q9Y261 457 aaPredicted RBP11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 NBEAL1Q6ZS30 2694 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 MPPED1O15442 326 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 PF4V1P10720 104 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 ANXA3P12429 323 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 NQO2P16083 231 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 SUPT4H1P63272 117 aaKnown RBP11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 TMEM267Q0VDI3 215 aaPredicted RBP11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 POU2AF1Q16633 256 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 KLHL30-AS1Q8NEE0 82 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 VSTM2AQ8TAG5 236 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 MYOZ3Q8TDC0 251 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 ZNF436Q9C0F3 470 aaPredicted RBP11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 COMMD9Q9P000 198 aa11.76□□□□□ -0.53
SMPDL3A-201ENST00000368440 WNK1Q9H4A3 2382 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 FBN3Q75N90 2809 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 MSGN1A6NI15 193 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 FAM25EA8MYX2 175 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 E7EUB6 86 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 SFT2D2O95562 160 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 IGKV1-39P01597 117 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 IGKV1D-39P04432 117 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 S100GP29377 79 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 KIAA0141Q14154 515 aaPredicted RBP11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 TCTEX1D1Q8N7M0 179 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 PHB2Q99623 299 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 TMEM140Q9NV12 185 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 BET1LQ9NYM9 111 aa11.75□□□□□ -0.53
SMPDL3A-201ENST00000368440 A0A1B0GW64 132 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 MARCH11A6NNE9 402 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 IL6RP08887 468 aaPredicted RBP11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 G6PCP35575 357 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms