RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 LINC00311Q8N616 119 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 OR13D1Q8NGV5 346 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 OSR1Q8TAX0 266 aaPredicted RBP8.89□□□□□ -0.99
H3F3A-202ENST00000366814 TMEM186Q96B77 213 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 TIMD4Q96H15 378 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 CCL19Q99731 98 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 BEX4Q9NWD9 120 aaPredicted RBP8.89□□□□□ -0.99
H3F3A-202ENST00000366814 FKBP11Q9NYL4 201 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 ITPR3Q14573 2671 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 TRAV1-1A0A0B4J248 108 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 RBFOX3A6NFN3 312 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 H7C2Y5 167 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 J3QR06 171 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 ARG1P05089 322 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 CT45A6P0DMU7 189 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 CT45A5P0DMU8 189 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 CT45A7P0DMV0 189 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 FGF7P21781 194 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 HSPE1P61604 102 aaKnown RBP8.88□□□□□ -0.99
H3F3A-202ENST00000366814 GUCA2BQ16661 112 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 TMEM155Q4W5P6 130 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 UTF1Q5T230 341 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 ATRAIDQ6UW56 229 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 C1orf229Q6ZS94 237 aaPredicted RBP8.88□□□□□ -0.99
H3F3A-202ENST00000366814 OR9G1Q8NH87 305 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 NEU4Q8WWR8 484 aaPredicted RBP8.88□□□□□ -0.99
H3F3A-202ENST00000366814 GGACTQ9BVM4 153 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 SLC35B3Q9H1N7 401 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 TCF19Q9Y242 345 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 RFNGQ9Y644 331 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 ARFGEF3Q5TH69 2177 aa8.88□□□□□ -0.99
H3F3A-202ENST00000366814 hCG_1809904A0A1W2PP81 198 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 A0A1W2PPE2 198 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 A0A1W2PR64 198 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 A0A1W2PRV1 198 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 PMS2P5A8MQ11 134 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 LCE2BO14633 110 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 TSPAN4O14817 238 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 VWC2Q2TAL6 325 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 OR8B3Q8NGG8 313 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 ZNF596Q8TC21 504 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 RAB1CQ92928 201 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 TNFRSF14Q92956 283 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 OR8B2Q96RD0 313 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 TMEM14BQ9NUH8 114 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 MIOXQ9UGB7 285 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 AKAP9Q99996 3911 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 HIVEP1P15822 2718 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 MAP1AP78559 2803 aaPredicted RBP8.87□□□□□ -0.99
H3F3A-202ENST00000366814 A0A087X0M5 115 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 A0A1B0GX30 115 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 C15orf62A8K5M9 175 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 MPDU1O75352 247 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 IFNA1P01562 189 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 IGHV2-70P01814 119 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 IGHV1-8P0DP01 117 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 CD99P14209 185 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 COL8A2P25067 703 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 RAB13P51153 203 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 SAMD5Q5TGI4 173 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 SPSB3Q6PJ21 355 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 ETV3LQ6ZN32 361 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 CENPVQ7Z7K6 275 aaPredicted RBP8.87□□□□□ -0.99
H3F3A-202ENST00000366814 RPRMQ9NS64 109 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 BET1LQ9NYM9 111 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 ZNF257Q9Y2Q1 563 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 OR51B2Q9Y5P1 312 aa8.87□□□□□ -0.99
H3F3A-202ENST00000366814 TRAV3A0A0B4J244 114 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 FAM157AC9JC47 383 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 IFNA4P05014 189 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 CD1BP29016 333 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 VDAC2P45880 294 aaPredicted RBP8.86□□□□□ -0.99
H3F3A-202ENST00000366814 PRRX1P54821 245 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 ELLP55199 621 aaPredicted RBP8.86□□□□□ -0.99
H3F3A-202ENST00000366814 DLX6P56179 175 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 PDPNQ86YL7 162 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 VSTM2AQ8TAG5 236 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 MBD3L1Q8WWY6 194 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 FLYWCH2Q96CP2 140 aaKnown RBP8.86□□□□□ -0.99
H3F3A-202ENST00000366814 HARBI1Q96MB7 349 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 PCGF1Q9BSM1 259 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 MRPL20Q9BYC9 149 aaKnown RBP8.86□□□□□ -0.99
H3F3A-202ENST00000366814 TMEM133Q9H2Q1 129 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 PLEKHA3Q9HB20 300 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 KCNIP2Q9NS61 270 aa8.86□□□□□ -0.99
H3F3A-202ENST00000366814 SMCO3A2RU48 225 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 LYNX1G3V0Z9 82 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 UPK2O00526 184 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 FCN3O75636 299 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 KBTBD11O94819 623 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 RBP4P02753 201 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 LYNX1P0DP58 116 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 MC5RP33032 325 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 ZNF137PP52743 207 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 ATP5IP56385 69 aaPredicted RBP8.85□□□□□ -0.99
H3F3A-202ENST00000366814 DLK1P80370 383 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 TMEM177Q53S58 311 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 KHDC3LQ587J8 217 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 SOHLH1Q5JUK2 328 aa8.85□□□□□ -0.99
H3F3A-202ENST00000366814 TGIF2LXQ8IUE1 241 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms