RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 P01737 135 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 COX7A1P24310 79 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 TNXAQ16473 311 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 INO80CQ6PI98 192 aaPredicted RBP11.71□□□□□ -0.54
COL6A1-201ENST00000361866 ZCCHC14Q8WYQ9 949 aaKnown RBP11.71□□□□□ -0.54
COL6A1-201ENST00000361866 TMEM210A6NLX4 147 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 MGST3O14880 152 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 CSN1S1P47710 185 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 LCN2P80188 198 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 PSG7Q13046 419 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 C10orf113Q5VZT2 155 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 HCP5Q6MZN7 132 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 OR2T6Q8NHC8 308 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 MBD3L1Q8WWY6 194 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 PRNDQ9UKY0 176 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 TBL2Q9Y4P3 447 aaKnown RBP11.71□□□□□ -0.54
COL6A1-201ENST00000361866 KLF7O75840 302 aaPredicted RBP11.7□□□□□ -0.54
COL6A1-201ENST00000361866 FAM162BQ5T6X4 162 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 C17orf82Q86X59 251 aaPredicted RBP11.7□□□□□ -0.54
COL6A1-201ENST00000361866 OR4B1Q8NGF8 309 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 NABP2Q9BQ15 211 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 BRCA2P51587 3418 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 NDUFB3O43676 98 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 IL15RAQ13261 267 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 GTF3AQ92664 365 aaKnown RBP11.7□□□□□ -0.54
COL6A1-201ENST00000361866 SPSB4Q96A44 273 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 ADMP35318 185 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 FOXC1Q12948 553 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 RSPO1Q2MKA7 263 aaPredicted RBP11.7□□□□□ -0.54
COL6A1-201ENST00000361866 FAM214BQ7L5A3 538 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 ST6GALNAC6Q969X2 333 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 PAXXQ9BUH6 204 aa11.7□□□□□ -0.54
COL6A1-201ENST00000361866 PARD6GQ9BYG4 376 aaPredicted RBP11.7□□□□□ -0.54
COL6A1-201ENST00000361866 GZMBP10144 247 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 IGFBP2P18065 325 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 KIR2DS2P43631 304 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 HSPE1P61604 102 aaKnown RBP11.69□□□□□ -0.54
COL6A1-201ENST00000361866 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 ITLN1Q8WWA0 313 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 ADTRPQ96IZ2 230 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
COL6A1-201ENST00000361866 UQCR10Q9UDW1 63 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 FAM157AC9JC47 383 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 IL6RP08887 468 aaPredicted RBP11.69□□□□□ -0.54
COL6A1-201ENST00000361866 COX5BP10606 129 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 GABRA6Q16445 453 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 GMPPAQ96IJ6 420 aaPredicted RBP11.69□□□□□ -0.54
COL6A1-201ENST00000361866 TMEM191AQ9H0A3 160 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 DNAJC4Q9NNZ3 241 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 TNFRSF1AP19438 455 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 RPL24P83731 157 aaKnown RBP11.69□□□□□ -0.54
COL6A1-201ENST00000361866 KRTCAP3Q53RY4 240 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 LEMD1Q68G75 181 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 ZNF738Q8NE65 137 aa11.69□□□□□ -0.54
COL6A1-201ENST00000361866 SEBOXQ9HB31 216 aaPredicted RBP11.69□□□□□ -0.54
COL6A1-201ENST00000361866 KLF2Q9Y5W3 355 aaPredicted RBP11.69□□□□□ -0.54
COL6A1-201ENST00000361866 SMPD2O60906 423 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 CA2P00918 260 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 GSX1Q9H4S2 264 aaPredicted RBP11.68□□□□□ -0.54
COL6A1-201ENST00000361866 ZNF703Q9H7S9 590 aaPredicted RBP11.68□□□□□ -0.54
COL6A1-201ENST00000361866 GNB4Q9HAV0 340 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 PILRBQ9UKJ0 227 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 IGKV1-6A0A0C4DH72 117 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 KLK10O43240 276 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 MT-ND6P03923 174 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 RPL30P62888 115 aaKnown RBP11.68□□□□□ -0.54
COL6A1-201ENST00000361866 OR5R1Q8NH85 324 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 FAM122AQ96E09 287 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 CALYQ9NYX4 217 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 COX19Q49B96 90 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 LRRC10Q5BKY1 277 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 ARL6IP6Q8N6S5 226 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 LAMA3Q16787 3333 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 PGPA6NDG6 321 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 DPRXA6NFQ7 191 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 REG1AP05451 166 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
COL6A1-201ENST00000361866 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 TXNDC17Q9BRA2 123 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 TMEM106BQ9NUM4 274 aa11.68□□□□□ -0.54
COL6A1-201ENST00000361866 THADAQ6YHU6 1953 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 PRRG2O14669 202 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 HLA-DQA1P01909 254 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 LGALS4P56470 323 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 ARSJQ5FYB0 599 aaPredicted RBP11.67□□□□□ -0.54
COL6A1-201ENST00000361866 BHLHA15Q7RTS1 189 aaPredicted RBP11.67□□□□□ -0.54
COL6A1-201ENST00000361866 GGNQ86UU5 652 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 OR8A1Q8NGG7 326 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 NGBQ9NPG2 151 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 RNF7Q9UBF6 113 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 AMMECR1Q9Y4X0 333 aaPredicted RBP11.67□□□□□ -0.54
COL6A1-201ENST00000361866 SPAARA0A1B0GVQ0 90 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 K7ERU9 68 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 PSPNO60542 156 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 CA1P00915 261 aaPredicted RBP11.67□□□□□ -0.54
COL6A1-201ENST00000361866 MIR17HGQ75NE6 70 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 MUC15Q8N387 334 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 A0A1B0GW64 132 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 A0A1W2PN81 502 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms