RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 OR4A5Q8NH83 315 aa12.95□□□□□ -0.34
COL9A1-203ENST00000360859 MARC2Q969Z3 335 aa12.95□□□□□ -0.34
COL9A1-203ENST00000360859 BET1LQ9NYM9 111 aa12.95□□□□□ -0.34
COL9A1-203ENST00000360859 A0A0J9YWU9 116 aa12.94□□□□□ -0.34
COL9A1-203ENST00000360859 NOTOA8MTQ0 251 aa12.94□□□□□ -0.34
COL9A1-203ENST00000360859 TNFSF12O43508 249 aa12.94□□□□□ -0.34
COL9A1-203ENST00000360859 GPR183P32249 361 aa12.94□□□□□ -0.34
COL9A1-203ENST00000360859 OR2B8PP59922 312 aa12.94□□□□□ -0.34
COL9A1-203ENST00000360859 EWSR1Q01844 656 aaKnown RBP eCLIP12.94□□□□□ -0.34
COL9A1-203ENST00000360859 TIMM50Q3ZCQ8 353 aa12.94□□□□□ -0.34
COL9A1-203ENST00000360859 RBPMS2Q6ZRY4 209 aaKnown RBP12.94□□□□□ -0.34
COL9A1-203ENST00000360859 OR1L6Q8NGR2 347 aa12.94□□□□□ -0.34
COL9A1-203ENST00000360859 ZNF502Q8TBZ5 544 aa12.94□□□□□ -0.34
COL9A1-203ENST00000360859 HRASLSQ9HDD0 168 aa12.94□□□□□ -0.34
COL9A1-203ENST00000360859 CCL28Q9NRJ3 127 aa12.94□□□□□ -0.34
COL9A1-203ENST00000360859 MRPL27Q9P0M9 148 aaKnown RBP12.94□□□□□ -0.34
COL9A1-203ENST00000360859 IGHV3-35A0A0C4DH35 117 aa12.93□□□□□ -0.34
COL9A1-203ENST00000360859 IGLC7A0M8Q6 106 aa12.93□□□□□ -0.34
COL9A1-203ENST00000360859 SCGNO76038 276 aa12.93□□□□□ -0.34
COL9A1-203ENST00000360859 WFDC3Q8IUB2 231 aa12.93□□□□□ -0.34
COL9A1-203ENST00000360859 SPAG16Q8N0X2 631 aa12.93□□□□□ -0.34
COL9A1-203ENST00000360859 OR2C3Q8N628 320 aa12.93□□□□□ -0.34
COL9A1-203ENST00000360859 SECTM1Q8WVN6 248 aa12.93□□□□□ -0.34
COL9A1-203ENST00000360859 AIFM2Q9BRQ8 373 aa12.93□□□□□ -0.34
COL9A1-203ENST00000360859 BLOC1S6Q9UL45 172 aa12.93□□□□□ -0.34
COL9A1-203ENST00000360859 UFC1Q9Y3C8 167 aa12.93□□□□□ -0.34
COL9A1-203ENST00000360859 NUPR2A6NF83 97 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 PTHLHP12272 177 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 FCGR2CP31995 323 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 ELLP55199 621 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-203ENST00000360859 TNFRSF9Q07011 255 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 MSMO1Q15800 293 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 PLET1Q6UQ28 207 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 Q6ZWC4 215 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 LYG2Q86SG7 212 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 OR13F1Q8NGS4 319 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 CNBD2Q96M20 576 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 ZNF436Q9C0F3 470 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-203ENST00000360859 C5orf66Q9H5L9 145 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 TXNL4BQ9NX01 149 aaKnown RBP12.92□□□□□ -0.34
COL9A1-203ENST00000360859 DAPK2Q9UIK4 370 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 TP53TG1Q9Y2A0 90 aa12.92□□□□□ -0.34
COL9A1-203ENST00000360859 TRAV3A0A0B4J244 114 aa12.91□□□□□ -0.34
COL9A1-203ENST00000360859 SULT1C2O00338 296 aa12.91□□□□□ -0.34
COL9A1-203ENST00000360859 RBFOX2O43251 390 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL9A1-203ENST00000360859 SPRY2O43597 315 aa12.91□□□□□ -0.34
COL9A1-203ENST00000360859 PTBP1P26599 531 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL9A1-203ENST00000360859 FGF9P31371 208 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-203ENST00000360859 BMI1P35226 326 aa12.91□□□□□ -0.34
COL9A1-203ENST00000360859 APOC4P55056 127 aa12.91□□□□□ -0.34
COL9A1-203ENST00000360859 TAS2R31P59538 309 aa12.91□□□□□ -0.34
COL9A1-203ENST00000360859 ARPC4P59998 168 aa12.91□□□□□ -0.34
COL9A1-203ENST00000360859 CEMP1Q6PRD7 247 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-203ENST00000360859 SLC38A6Q8IZM9 456 aa12.91□□□□□ -0.34
COL9A1-203ENST00000360859 BEST4Q8NFU0 473 aa12.91□□□□□ -0.34
COL9A1-203ENST00000360859 LGALS14Q8TCE9 139 aa12.91□□□□□ -0.34
COL9A1-203ENST00000360859 SPAG8Q99932 426 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-203ENST00000360859 UPK2O00526 184 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 PPYP01298 95 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 POU2AF1Q16633 256 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 DEFB135Q30KP9 77 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 TPRA1Q86W33 373 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 GVQW1Q8N7I0 195 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 ZBTB34Q8NCN2 500 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 TMEM190Q8WZ59 177 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.34
COL9A1-203ENST00000360859 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 SLC5A7Q9GZV3 580 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 RHBDL2Q9NX52 303 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 THYN1Q9P016 225 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 UBQLN2Q9UHD9 624 aa12.9□□□□□ -0.34
COL9A1-203ENST00000360859 UBE2CO00762 179 aa12.89□□□□□ -0.35
COL9A1-203ENST00000360859 TSPAN4O14817 238 aa12.89□□□□□ -0.35
COL9A1-203ENST00000360859 HPRT1P00492 218 aa12.89□□□□□ -0.35
COL9A1-203ENST00000360859 NQO2P16083 231 aa12.89□□□□□ -0.35
COL9A1-203ENST00000360859 SFXN4Q6P4A7 337 aa12.89□□□□□ -0.35
COL9A1-203ENST00000360859 IZUMO2Q6UXV1 221 aa12.89□□□□□ -0.35
COL9A1-203ENST00000360859 HOGA1Q86XE5 327 aa12.89□□□□□ -0.35
COL9A1-203ENST00000360859 OR10W1Q8NGF6 305 aa12.89□□□□□ -0.35
COL9A1-203ENST00000360859 VN1R17PQ8TDU5 208 aa12.89□□□□□ -0.35
COL9A1-203ENST00000360859 QTRT1Q9BXR0 403 aaKnown RBP12.89□□□□□ -0.35
COL9A1-203ENST00000360859 RRP15Q9Y3B9 282 aaKnown RBP12.89□□□□□ -0.35
COL9A1-203ENST00000360859 TGOLN2O43493 480 aa12.88□□□□□ -0.35
COL9A1-203ENST00000360859 RPA2P15927 270 aa12.88□□□□□ -0.35
COL9A1-203ENST00000360859 HSPA13P48723 471 aa12.88□□□□□ -0.35
COL9A1-203ENST00000360859 CATR1Q13166 79 aa12.88□□□□□ -0.35
COL9A1-203ENST00000360859 UBE2UQ5VVX9 321 aa12.88□□□□□ -0.35
COL9A1-203ENST00000360859 VCX3BQ9H321 246 aa12.88□□□□□ -0.35
COL9A1-203ENST00000360859 TMEM140Q9NV12 185 aa12.88□□□□□ -0.35
COL9A1-203ENST00000360859 TRAV18A0A075B6X5 111 aa12.87□□□□□ -0.35
COL9A1-203ENST00000360859 KIR2DL5BA0A0G2JN68 375 aa12.87□□□□□ -0.35
COL9A1-203ENST00000360859 KIR2DL5BA0A0G2JPC4 375 aa12.87□□□□□ -0.35
COL9A1-203ENST00000360859 OR2T8A6NH00 312 aa12.87□□□□□ -0.35
COL9A1-203ENST00000360859 CYB5BO43169 146 aa12.87□□□□□ -0.35
COL9A1-203ENST00000360859 FGF2P09038 288 aa12.87□□□□□ -0.35
COL9A1-203ENST00000360859 ATF4P18848 351 aaPredicted RBP12.87□□□□□ -0.35
COL9A1-203ENST00000360859 PSMB9P28065 219 aa12.87□□□□□ -0.35
COL9A1-203ENST00000360859 FXYD4P59646 89 aa12.87□□□□□ -0.35
COL9A1-203ENST00000360859 ODF3L2Q3SX64 289 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms