RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 CYSLTR1Q9Y271 337 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 hCG_38984A0A1B0GV85 526 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 CXCL1P09341 107 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 ZNF585BQ52M93 769 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 MYO7AQ13402 2215 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 SCN3AQ9NY46 2000 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 PSMB11A5LHX3 300 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 CCL4P13236 92 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 ITLN1Q8WWA0 313 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 NPIPB4C9JG80 1138 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 RRN3P1Q2M238 152 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 GAGE13Q4V321 117 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 UNQ5815/PRO19632Q6UWF5 114 aa11.4□□□□□ -0.58
CCDC144A-203ENST00000360495 FOXL2P58012 376 aa11.4□□□□□ -0.59
CCDC144A-203ENST00000360495 GAGE2BQ13066 116 aa11.4□□□□□ -0.59
CCDC144A-203ENST00000360495 GAGE2EQ4V326 116 aa11.4□□□□□ -0.59
CCDC144A-203ENST00000360495 OR10J3Q5JRS4 329 aa11.4□□□□□ -0.59
CCDC144A-203ENST00000360495 TPTE2P1Q5T6R2 138 aa11.4□□□□□ -0.59
CCDC144A-203ENST00000360495 ZFAND6Q6FIF0 208 aa11.4□□□□□ -0.59
CCDC144A-203ENST00000360495 FMC1Q96HJ9 113 aa11.4□□□□□ -0.59
CCDC144A-203ENST00000360495 GAGE2DQ9UEU5 116 aa11.4□□□□□ -0.59
CCDC144A-203ENST00000360495 A8MWV9 139 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 LEPP41159 167 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 SRSF4Q08170 494 aaKnown RBP11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 C1QL4Q86Z23 238 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 PRDM14Q9GZV8 571 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 HOXA3O43365 443 aaPredicted RBP11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 TSPOP30536 169 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 STARD6P59095 220 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 C1QL2Q7Z5L3 287 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 UBALD2Q8IYN6 164 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 M0R381 172 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 SYNGR3O43761 229 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 HSD52Q0P140 79 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 Q6AWC8 147 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 MIR17HGQ75NE6 70 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 DNASE2BQ8WZ79 361 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 ST20Q9HBF5 79 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 CRYBA2P53672 197 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 LHX8Q68G74 356 aa11.39□□□□□ -0.59
CCDC144A-203ENST00000360495 IGHV3OR16-12A0A075B7B8 117 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 PTGDSP41222 190 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 PYY3Q5JQD4 70 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 ZNF784Q8NCA9 323 aaPredicted RBP11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 TTTY12Q9BZ98 90 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 IFI27L2Q9H2X8 130 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 LTBP4Q8N2S1 1624 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 CCDC88CQ9P219 2028 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 BTAF1O14981 1849 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 TM2D1Q9BX74 207 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 TRBV24-1A0A075B6N3 115 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 TRAV12-3A0A0B4J271 114 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 CD5P06127 495 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 NR2C2APQ86WQ0 139 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 H0YIZ8 118 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 FAM106CPP0CH98 169 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 PF4V1P10720 104 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 RAB9AP51151 201 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 CCL20P78556 96 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 KIAA0100Q14667 2235 aaKnown RBP11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 LRP5O75197 1615 aa11.38□□□□□ -0.59
CCDC144A-203ENST00000360495 NPFFO15130 113 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 IGHMP01871 453 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 CACNG7P62955 275 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 PAX2Q02962 417 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 FAM159AQ6UWV7 190 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 PNKDQ8N490 385 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 NAA38Q9BRA0 125 aaKnown RBP11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 FSCN3Q9NQT6 498 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 DICER1Q9UPY3 1922 aaKnown RBP11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 TOGARAM1Q9Y4F4 1720 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 GTSF1LQ9H1H1 148 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 LPAR2Q9HBW0 351 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 PILRAQ9UKJ1 303 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 C16orf97H3BN30 126 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 FTH1P19P0C7X4 201 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 TEX45Q8NA69 505 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 RNASEH2CQ8TDP1 164 aaKnown RBP11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 GNB1LQ9BYB4 327 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 TAF1P21675 1872 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 HBDP02042 147 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 CSRP3P50461 194 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 RPL39P5Q59GN2 51 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 CIARTQ8N365 385 aaPredicted RBP11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 DIRC2Q96SL1 478 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 VKORC1Q9BQB6 163 aa11.37□□□□□ -0.59
CCDC144A-203ENST00000360495 FER1L6-AS1Q8NA97 138 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 TRBV7-9A0A0J9YWB2 115 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 IGHV5-10-1A0A0J9YXX1 117 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 C4orf51C9J302 202 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 DPM2O94777 84 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 UBE2V1Q13404 147 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 OR52E5Q8NH55 327 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 TMEM242Q9NWH2 141 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 PGPEP1Q9NXJ5 209 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 NRAPQ86VF7 1730 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 KIAA1551Q9HCM1 1747 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 GLI3P10071 1580 aa11.36□□□□□ -0.59
CCDC144A-203ENST00000360495 C9JCJ5 164 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms