RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 RNF5Q99942 180 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 C7orf69Q9H7B7 122 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 TPSG1Q9NRR2 321 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 IFNA7P01567 189 aa18.6■□□□□ 0.57
SDF4-202ENST00000360001 CRYGBP07316 175 aa18.6■□□□□ 0.57
SDF4-202ENST00000360001 GATA3P23771 443 aa18.6■□□□□ 0.57
SDF4-202ENST00000360001 VDAC2P45880 294 aaPredicted RBP18.6■□□□□ 0.57
SDF4-202ENST00000360001 SULT1A1P50225 295 aa18.6■□□□□ 0.57
SDF4-202ENST00000360001 PSG5Q15238 335 aa18.6■□□□□ 0.57
SDF4-202ENST00000360001 MRGPRG-AS1Q2M3A8 158 aa18.6■□□□□ 0.57
SDF4-202ENST00000360001 TMEM14EPQ6UXP3 125 aa18.6■□□□□ 0.57
SDF4-202ENST00000360001 OR4C12Q96R67 309 aa18.6■□□□□ 0.57
SDF4-202ENST00000360001 TSNAXQ99598 290 aaKnown RBP18.6■□□□□ 0.57
SDF4-202ENST00000360001 FKBP11Q9NYL4 201 aa18.6■□□□□ 0.57
SDF4-202ENST00000360001 ITPR2Q14571 2701 aa18.6■□□□□ 0.57
SDF4-202ENST00000360001 IGHV1-69DA0A0B4J2H0 117 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 IGHV1-69P01742 117 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 RPL8P62917 257 aaKnown RBP18.59■□□□□ 0.57
SDF4-202ENST00000360001 STX12Q86Y82 276 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 TEX45Q8NA69 505 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 ZNF430Q9H8G1 570 aaPredicted RBP18.59■□□□□ 0.57
SDF4-202ENST00000360001 TEX50A0A1B0GTY4 177 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 IGKV1D-33P01593 117 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 IGKV1-33P01594 117 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 FGF2P09038 288 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 METTL15P1P0C7V9 234 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 CD24P25063 80 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 FBLN7Q53RD9 439 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 TMEM217Q8N7C4 229 aa18.59■□□□□ 0.57
SDF4-202ENST00000360001 TRAV40A0A0B4J280 105 aa18.58■□□□□ 0.56
SDF4-202ENST00000360001 DYNLT3P51808 116 aa18.58■□□□□ 0.56
SDF4-202ENST00000360001 ALKAL2Q6UX46 152 aa18.58■□□□□ 0.56
SDF4-202ENST00000360001 OR5C1Q8NGR4 320 aa18.58■□□□□ 0.56
SDF4-202ENST00000360001 OR5B3Q8NH48 314 aa18.58■□□□□ 0.56
SDF4-202ENST00000360001 IGHV3OR16-10A0A075B7F0 116 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 MOSP00540 346 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 OPN1MWP04001 364 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 SNRNP70P08621 437 aaKnown RBP18.57■□□□□ 0.56
SDF4-202ENST00000360001 OPN1MW2P0DN77 364 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 OPN1MW3P0DN78 364 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 PRCDQ00LT1 54 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 ARL16Q0P5N6 197 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 PJVKQ0ZLH3 352 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 RUSC1-AS1Q66K80 236 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 HAPLN4Q86UW8 402 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 THNSL2Q86YJ6 484 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 EAF1Q96JC9 268 aaPredicted RBP18.57■□□□□ 0.56
SDF4-202ENST00000360001 UBQLN2Q9UHD9 624 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 SIGLEC9Q9Y336 463 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 STRAPQ9Y3F4 350 aaKnown RBP18.57■□□□□ 0.56
SDF4-202ENST00000360001 ZANQ9Y493 2812 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 CELSR1Q9NYQ6 3014 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 LY86O95711 162 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 IGHV4-31P0DP07 118 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 TPT1P13693 172 aaKnown RBP18.57■□□□□ 0.56
SDF4-202ENST00000360001 HOXA1P49639 335 aaPredicted RBP18.57■□□□□ 0.56
SDF4-202ENST00000360001 CLINT1Q14677 625 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 BAP18Q8IXM2 172 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 HEYLQ9NQ87 328 aaPredicted RBP18.57■□□□□ 0.56
SDF4-202ENST00000360001 PAIP2BQ9ULR5 123 aaKnown RBP18.57■□□□□ 0.56
SDF4-202ENST00000360001 HECTD1Q9ULT8 2610 aa18.57■□□□□ 0.56
SDF4-202ENST00000360001 JTBO76095 146 aa18.56■□□□□ 0.56
SDF4-202ENST00000360001 AVPP01185 164 aa18.56■□□□□ 0.56
SDF4-202ENST00000360001 IGHV4-38-2P0DP08 117 aa18.56■□□□□ 0.56
SDF4-202ENST00000360001 TMEM249Q2WGJ8 235 aa18.56■□□□□ 0.56
SDF4-202ENST00000360001 HINT2Q9BX68 163 aa18.56■□□□□ 0.56
SDF4-202ENST00000360001 COMMD5Q9GZQ3 224 aa18.56■□□□□ 0.56
SDF4-202ENST00000360001 HIPK2Q9H2X6 1198 aa18.56■□□□□ 0.56
SDF4-202ENST00000360001 F2RL1P55085 397 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 EBI3Q14213 229 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 HNF4GQ14541 408 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 PRSS8Q16651 343 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 STPG2Q8N412 459 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 UBAC2Q8NBM4 344 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 OR2T10Q8NGZ9 312 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 CLCC1Q96S66 551 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 METTL1Q9UBP6 276 aaKnown RBP18.55■□□□□ 0.56
SDF4-202ENST00000360001 PRRC2AP48634 2157 aaKnown RBP18.55■□□□□ 0.56
SDF4-202ENST00000360001 CREBBPQ92793 2442 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 C15orf62A8K5M9 175 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 TGFAP01135 160 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 BRD3OSQ6XYD6 125 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 OR1S2Q8NGQ3 325 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 OR1L8Q8NGR8 309 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 SCARB1Q8WTV0 552 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 PHYHIPLQ96FC7 376 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 NDUFA4L2Q9NRX3 87 aa18.55■□□□□ 0.56
SDF4-202ENST00000360001 PMS2P5A8MQ11 134 aa18.54■□□□□ 0.56
SDF4-202ENST00000360001 HES1Q14469 280 aa18.54■□□□□ 0.56
SDF4-202ENST00000360001 MMDQ15546 238 aa18.54■□□□□ 0.56
SDF4-202ENST00000360001 C10orf55Q5SWW7 151 aa18.54■□□□□ 0.56
SDF4-202ENST00000360001 MMD2Q8IY49 270 aa18.54■□□□□ 0.56
SDF4-202ENST00000360001 FBXL15Q9H469 300 aa18.54■□□□□ 0.56
SDF4-202ENST00000360001 PLXNB1O43157 2135 aa18.54■□□□□ 0.56
SDF4-202ENST00000360001 E7EUB6 86 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 RRHO14718 337 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 KLF17Q5JT82 389 aaPredicted RBP18.53■□□□□ 0.56
SDF4-202ENST00000360001 PPP1R27Q86WC6 154 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 Q8N6K4 173 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 WFDC11Q8NEX6 87 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms