RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 IAPPP10997 89 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 CD1BP29016 333 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 SPCS3P61009 180 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 TMEM249Q2WGJ8 235 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 LDLRAD2Q5SZI1 272 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 SMIM8Q96KF7 97 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 TSNAXQ99598 290 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 RNF5Q99942 180 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 AUP1Q9Y679 476 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 TLN2Q9Y4G6 2542 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 TRAV3A0A0B4J244 114 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 IGSF23A1L1A6 192 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 FAM24AA6NFZ4 105 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 SRRM4A7MD48 611 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 J3QLI3 93 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 NPFFO15130 113 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 VENTXO95231 258 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 IL6RP08887 468 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 FGF2P09038 288 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 PAX9P55771 341 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 UBA52P62987 128 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 EWSR1Q01844 656 aaKnown RBP eCLIP11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 HABP2Q14520 560 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 STX12Q86Y82 276 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 TMEM252Q8N6L7 170 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 DTD1Q8TEA8 209 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 CFHR4Q92496 578 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 ZNF471Q9BX82 626 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 TMEM14BQ9NUH8 114 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 HIF1ANQ9NWT6 349 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 FKBP11Q9NYL4 201 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 HIVEP2P31629 2446 aa11.14□□□□□ -0.63
PDLIM5-203ENST00000359265 CENPVL3A0A0U1RRI6 287 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 SPDEFO95238 335 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 TMEM50AO95807 157 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 IGLV2-23P01705 113 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 IGHV4-31P0DP07 118 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 SAA4P35542 130 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 BAXQ07812 192 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 SSX2Q16385 188 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 PDLIM3Q53GG5 364 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 CYB5R2Q6BCY4 276 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 ZNF767PQ75MW2 155 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 TEX45Q8NA69 505 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 OR8H1Q8NGG4 311 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 MALSU1Q96EH3 234 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 C7orf69Q9H7B7 122 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 FBXL17Q9UF56 701 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 TCF19Q9Y242 345 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 ZNF257Q9Y2Q1 563 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 OR51B2Q9Y5P1 312 aa11.13□□□□□ -0.63
PDLIM5-203ENST00000359265 TRAV40A0A0B4J280 105 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 IGHV1-69DA0A0B4J2H0 117 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 H3BP45 60 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 SLC25A17O43808 307 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 SCAF4O95104 1147 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 TGFAP01135 160 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 IFNA7P01567 189 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 IGHV1-69P01742 117 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 HOXA1P49639 335 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 HSPE1P61604 102 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 RPL8P62917 257 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 EIF5AP63241 154 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 TEX261Q6UWH6 196 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 OR5B3Q8NH48 314 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 RBMXL1Q96E39 390 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 ENY2Q9NPA8 101 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 U3KQ87 197 aa11.12□□□□□ -0.63
PDLIM5-203ENST00000359265 ZANQ9Y493 2812 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 BORCS7-ASMTA0A0B4J1R7 106 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 MOSP00540 346 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 BRS3P32247 399 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 SULT1A1P50225 295 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 NHLH2Q02577 135 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 PSG5Q15238 335 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 SPINK9Q5DT21 86 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 SPANXN5Q5MJ07 72 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 MMD2Q8IY49 270 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 OR2T10Q8NGZ9 312 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 STOML3Q8TAV4 291 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 ST8SIA2Q92186 375 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 SMIM3Q9BZL3 60 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 COMMD5Q9GZQ3 224 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 HIPK2Q9H2X6 1198 aa11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 STRAPQ9Y3F4 350 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-203ENST00000359265 IGKV1D-33P01593 117 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 IGKV1-33P01594 117 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 SNRNP70P08621 437 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 TPT1P13693 172 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 RPP30P78346 268 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 PRCDQ00LT1 54 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 TMEM267Q0VDI3 215 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 EXOSC2Q13868 293 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 HES1Q14469 280 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms