RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 R3HDM4Q96D70 268 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 FKBP11Q9NYL4 201 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 POLR3KQ9Y2Y1 108 aaPredicted RBP10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 SHISA9B4DS77 424 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 SPRY3O43610 288 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 PAGE4O60829 102 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 CLDN1O95832 211 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 CD3EP07766 207 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 OR8G2PQ6IF36 304 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 WDR86Q86TI4 376 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 LINC01551Q86U37 167 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 IL1F10Q8WWZ1 152 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 CHODLQ9H9P2 273 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 AKAP6Q13023 2319 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 DOPEY1Q5JWR5 2465 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 J3QT63 122 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 KITLGP21583 273 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 YPEL3P61236 119 aaPredicted RBP10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 FFAR4Q5NUL3 377 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 PRAMEF6Q5VXH4 476 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 Q8N7P7 452 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 NPCDR1Q9BY65 106 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 PPP1R14DQ9NXH3 145 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 LRRC30A6NM36 301 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 E7EQL1 145 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 PDE6DO43924 150 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 YPEL1O60688 119 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 OR10J1P30954 320 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 ERVK11-1P61568 191 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 MSMO1Q15800 293 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 ADIPOQQ15848 244 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 CLEC12BQ2HXU8 276 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 SPRNQ5BIV9 151 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 BTNL3Q6UXE8 466 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 RAB1CQ92928 201 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 YPEL2Q96QA6 119 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
RTFDC1-202ENST00000357348 TACC2O95359 2948 aa10.47□□□□□ -0.73
RTFDC1-202ENST00000357348 CDIPTO14735 213 aa10.47□□□□□ -0.73
RTFDC1-202ENST00000357348 HMGB3O15347 200 aaKnown RBP10.47□□□□□ -0.73
RTFDC1-202ENST00000357348 ESDP10768 282 aa10.47□□□□□ -0.73
RTFDC1-202ENST00000357348 ZNF826PQ6ZT77 177 aa10.47□□□□□ -0.73
RTFDC1-202ENST00000357348 NUP37Q8NFH4 326 aa10.47□□□□□ -0.73
RTFDC1-202ENST00000357348 OR10P1Q8NGE3 313 aa10.47□□□□□ -0.73
RTFDC1-202ENST00000357348 RTL8AQ9BWD3 113 aa10.47□□□□□ -0.73
RTFDC1-202ENST00000357348 ARFGEF3Q5TH69 2177 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 DEFB108AA8MXU0 73 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 C11orf94C9JXX5 98 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 SOX15O60248 233 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 IGHV3-13P01766 116 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 SELENOVP59797 346 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 SELENOTP62341 195 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 GNB1P62873 340 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 FAM78BQ5VT40 261 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 ZNF645Q8N7E2 425 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 OR1L1Q8NH94 360 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 KCNIP2Q9NS61 270 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 KCNS2Q9ULS6 477 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 TRAPPC1Q9Y5R8 145 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 TENM4Q6N022 2769 aa10.46□□□□□ -0.73
RTFDC1-202ENST00000357348 ODAMA1E959 279 aa10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 F6UZH7 168 aa10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 M0QZK8 103 aa10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 RAB29O14966 203 aa10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 ZNF16P17020 682 aaPredicted RBP10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 SSX8Q7RTT4 187 aa10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 C1orf174Q8IYL3 243 aa10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 SCCPDHQ8NBX0 429 aa10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 CIB3Q96Q77 187 aaPredicted RBP10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 ATG101Q9BSB4 218 aa10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 CBLN4Q9NTU7 201 aa10.46□□□□□ -0.74
RTFDC1-202ENST00000357348 IGLV3-9A0A075B6K5 115 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 TRAV39A0A0B4J263 110 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 C17orf112F2Z3M2 114 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 NUPR1O60356 82 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 OR2H2O95918 312 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 CHRNA7P36544 502 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 CDC34P49427 236 aaPredicted RBP10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 SRSF1Q07955 248 aaKnown RBP eCLIP10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 Q8IYB0 196 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 TMEM256Q8N2U0 113 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 TCTEX1D1Q8N7M0 179 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 C5orf30Q96GV9 206 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 C20orf144Q9BQM9 153 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 TXNDC17Q9BRA2 123 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 TUBG2Q9NRH3 451 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 CLN8Q9UBY8 286 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 TRAPPC2LQ9UL33 140 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 RBM7Q9Y580 266 aaKnown RBP10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 CENPEQ02224 2701 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 A0A0U1RQK1 487 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 A1L4Q6 167 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 ZNF320A2RRD8 509 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 SIRPB1O00241 398 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 BRWD1-AS2P59051 145 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 RPL30P62888 115 aaKnown RBP10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 ZNF146Q15072 292 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 DTD1Q8TEA8 209 aa10.45□□□□□ -0.74
RTFDC1-202ENST00000357348 OR2V2Q96R30 315 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms