RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 SIT1Q9Y3P8 196 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 TRAV8-7A0A075B6U6 113 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 MYOD1P15172 320 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 EMDP50402 254 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 TM4SF20Q53R12 229 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 PAAF1Q9BRP4 392 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 SDF2L1Q9HCN8 221 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 FAM106CPP0CH98 169 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 SPATA31B1PQ5VZV4 182 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 MOB3BQ86TA1 216 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 TMEM186Q96B77 213 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 ZNF479Q96JC4 524 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 HOXA3O43365 443 aaPredicted RBP6.91□□□□□ -1.3
HTT-201ENST00000355072 HSPE1P61604 102 aaKnown RBP6.91□□□□□ -1.3
HTT-201ENST00000355072 FOXF1Q12946 379 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 TNXAQ16473 311 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 DTX2Q86UW9 622 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 GDF15Q99988 308 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 CRISPLD2Q9H0B8 497 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 NUP210LQ5VU65 1888 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 TMPRSS2O15393 492 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 KLKB1P03952 638 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 CA6P23280 308 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 CCL20P78556 96 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 ABCA2Q9BZC7 2435 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 PVRIGQ6DKI7 326 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 SCGB3A1Q96QR1 104 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 NKX2-6A6NCS4 301 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 FGF16O43320 207 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 ZNF32P17041 273 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 PLSCR4Q9NRQ2 329 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 A0A1B0GTI1 187 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 SIVA1O15304 175 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 KIR3DL3Q8N743 410 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 TMUB1Q9BVT8 246 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 TRBV20OR9-2A0A075B6H5 130 aa6.9□□□□□ -1.3
HTT-201ENST00000355072 ASCL2Q99929 193 aa6.9□□□□□ -1.3
HTT-201ENST00000355072 ZNF585BQ52M93 769 aa6.9□□□□□ -1.3
HTT-201ENST00000355072 TSPO2Q5TGU0 170 aa6.9□□□□□ -1.3
HTT-201ENST00000355072 ARHGAP21Q5T5U3 1957 aa6.9□□□□□ -1.3
HTT-201ENST00000355072 SLC25A39Q9BZJ4 359 aaPredicted RBP6.9□□□□□ -1.3
HTT-201ENST00000355072 PGFP49763 221 aa6.9□□□□□ -1.3
HTT-201ENST00000355072 TP53INP2Q8IXH6 220 aa6.9□□□□□ -1.3
HTT-201ENST00000355072 ZNF415Q09FC8 603 aa6.9□□□□□ -1.3
HTT-201ENST00000355072 MLF2Q15773 248 aaPredicted RBP6.9□□□□□ -1.3
HTT-201ENST00000355072 FAM159AQ6UWV7 190 aa6.9□□□□□ -1.3
HTT-201ENST00000355072 ZNF418Q8TF45 676 aaPredicted RBP6.9□□□□□ -1.3
HTT-201ENST00000355072 TTC28Q96AY4 2481 aa6.9□□□□□ -1.3
HTT-201ENST00000355072 VHLLQ6RSH7 139 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 UNQ9370/PRO34162Q6UXP9 181 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 FGF22Q9HCT0 170 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 CCL27Q9Y4X3 112 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 ZNF488Q96MN9 340 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 SPXQ9BT56 116 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 IFITM1P13164 125 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 RRN3P1Q2M238 152 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 OR52M1Q8NGK5 317 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 MMP17Q9ULZ9 603 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 MRPS18BQ9Y676 258 aaKnown RBP6.9□□□□□ -1.31
HTT-201ENST00000355072 ID4P47928 161 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 ZNF793Q6ZN11 406 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 MUC4Q99102 2169 aa6.9□□□□□ -1.31
HTT-201ENST00000355072 C1orf210Q8IVY1 113 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 MESP2Q0VG99 397 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 C1orf185Q5T7R7 199 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 FBXO46Q6PJ61 603 aaPredicted RBP6.89□□□□□ -1.31
HTT-201ENST00000355072 ZNF205O95201 554 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 TIMP3P35625 211 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 MFAP4P55083 255 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 OCIAD2Q56VL3 154 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 LYPD8Q6UX82 237 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 TNFRSF12AQ9NP84 129 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 F2RL2O00254 374 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 PAX2Q02962 417 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 RELTQ969Z4 430 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 RNF7Q9UBF6 113 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 DHCR7Q9UBM7 475 aaKnown RBP6.89□□□□□ -1.31
HTT-201ENST00000355072 KLF17Q5JT82 389 aaPredicted RBP6.89□□□□□ -1.31
HTT-201ENST00000355072 CACNA1AO00555 2505 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 NDUFC2O95298 119 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 PRSS2P07478 247 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 CLDN2P57739 230 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 ADAD2Q8NCV1 583 aaKnown RBP6.89□□□□□ -1.31
HTT-201ENST00000355072 C16orf92Q96LL3 132 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 KCNK17Q96T54 332 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 MSL2Q9HCI7 577 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 PRSS8Q16651 343 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 PYY3Q5JQD4 70 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 SLC25A15Q9Y619 301 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 ZNF562Q6V9R5 426 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 AGRNO00468 2067 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 CENPWQ5EE01 88 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 CLEC1BQ9P126 229 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 IGHG4P01861 327 aa6.89□□□□□ -1.31
HTT-201ENST00000355072 SSBP2P81877 361 aaPredicted RBP6.89□□□□□ -1.31
HTT-201ENST00000355072 IGKCP01834 107 aa6.88□□□□□ -1.31
HTT-201ENST00000355072 SUMO2P61956 95 aaKnown RBP6.88□□□□□ -1.31
HTT-201ENST00000355072 WDR90Q96KV7 1748 aa6.88□□□□□ -1.31
HTT-201ENST00000355072 ZNF841Q6ZN19 808 aa6.88□□□□□ -1.31
HTT-201ENST00000355072 FGFRL1Q8N441 504 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms