RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ZNF292O60281 2723 aa18.16■□□□□ 0.5
UPF3A-201ENST00000351487 TMPRSS2O15393 492 aa18.15■□□□□ 0.5
UPF3A-201ENST00000351487 IL6RP08887 468 aaPredicted RBP18.15■□□□□ 0.5
UPF3A-201ENST00000351487 ARSJQ5FYB0 599 aaPredicted RBP18.15■□□□□ 0.5
UPF3A-201ENST00000351487 TMEM108Q6UXF1 575 aa18.15■□□□□ 0.5
UPF3A-201ENST00000351487 MIOXQ9UGB7 285 aa18.15■□□□□ 0.5
UPF3A-201ENST00000351487 F6UZH7 168 aa18.15■□□□□ 0.5
UPF3A-201ENST00000351487 SOD3P08294 240 aa18.15■□□□□ 0.5
UPF3A-201ENST00000351487 GNB1P62873 340 aa18.15■□□□□ 0.5
UPF3A-201ENST00000351487 MMP23AO75900 390 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 ATP5G3P48201 142 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 GNG10P50151 68 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 ZNF257Q9Y2Q1 563 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 FNDC10F2Z333 226 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 CXorf1O96002 111 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 ARL14EPLP0DKL9 152 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 PYY3Q5JQD4 70 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 ENY2Q9NPA8 101 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 PRNDQ9UKY0 176 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 LINC00312Q9Y6C7 94 aa18.14■□□□□ 0.49
UPF3A-201ENST00000351487 hADV38S2A0JD32 116 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 GFI1BQ5VTD9 330 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 TEPPQ6URK8 271 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 OR4X1Q8NH49 305 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 DCAF16Q9NXF7 216 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 ELOVL5Q9NYP7 299 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 NBEAQ8NFP9 2946 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 YLPM1P49750 1951 aaKnown RBP18.13■□□□□ 0.49
UPF3A-201ENST00000351487 A0A0G2JNJ9 132 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 TNFRSF1AP19438 455 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 UBE2G2P60604 165 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 CST9LP1Q5W188 147 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 LINC01551Q86U37 167 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 NECAP1Q8NC96 275 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 ELOVL1Q9BW60 279 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 Q9UFV3 132 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 OR51B2Q9Y5P1 312 aa18.13■□□□□ 0.49
UPF3A-201ENST00000351487 BOD1L1Q8NFC6 3051 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 LINC00587B1AMM8 73 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 C16orf97H3BN30 126 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 CA2P00918 260 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 CT45A6P0DMU7 189 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 CT45A5P0DMU8 189 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 CT45A7P0DMV0 189 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 CD99P14209 185 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 SRP14P37108 136 aaKnown RBP18.12■□□□□ 0.49
UPF3A-201ENST00000351487 TDGF1P3P51864 188 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 C4orf17Q53FE4 359 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 DOLPP1Q86YN1 238 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 GPR61Q9BZJ8 451 aa18.12■□□□□ 0.49
UPF3A-201ENST00000351487 NKX6-3A6NJ46 265 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 MKRN2OSH3BPM6 223 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 GGCTO75223 188 aaKnown RBP18.11■□□□□ 0.49
UPF3A-201ENST00000351487 RTL8BQ17RB0 113 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 PITPNC1Q9UKF7 332 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 PPP5D1E7EU14 171 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 PRRG2O14669 202 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 RPL29P47914 159 aaKnown RBP18.11■□□□□ 0.49
UPF3A-201ENST00000351487 PRCDQ00LT1 54 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 ADIPOQQ15848 244 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 PRSS33Q8NF86 280 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 NEUROG1Q92886 237 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 SNRNP40Q96DI7 357 aaKnown RBP18.11■□□□□ 0.49
UPF3A-201ENST00000351487 SLC35D1Q9NTN3 355 aa18.11■□□□□ 0.49
UPF3A-201ENST00000351487 C17orf100A8MU93 164 aa18.1■□□□□ 0.49
UPF3A-201ENST00000351487 UPK2O00526 184 aa18.1■□□□□ 0.49
UPF3A-201ENST00000351487 IGHV2-70P01814 119 aa18.1■□□□□ 0.49
UPF3A-201ENST00000351487 FAM3BP58499 235 aaPredicted RBP18.1■□□□□ 0.49
UPF3A-201ENST00000351487 CCL8P80075 99 aa18.1■□□□□ 0.49
UPF3A-201ENST00000351487 STPG3Q8N7X2 389 aa18.1■□□□□ 0.49
UPF3A-201ENST00000351487 SSMEM1Q8WWF3 244 aa18.1■□□□□ 0.49
UPF3A-201ENST00000351487 RP1L1Q8IWN7 2480 aaPredicted RBP18.1■□□□□ 0.49
UPF3A-201ENST00000351487 NDUFB4O95168 129 aa18.1■□□□□ 0.49
UPF3A-201ENST00000351487 TYMSP04818 313 aa18.1■□□□□ 0.49
UPF3A-201ENST00000351487 MEF2CQ06413 473 aaPredicted RBP18.1■□□□□ 0.49
UPF3A-201ENST00000351487 RAB31Q13636 194 aa18.1■□□□□ 0.49
UPF3A-201ENST00000351487 GAL3ST2Q9H3Q3 398 aa18.1■□□□□ 0.49
UPF3A-201ENST00000351487 DPRXA6NFQ7 191 aa18.09■□□□□ 0.49
UPF3A-201ENST00000351487 EFNB3Q15768 340 aa18.09■□□□□ 0.49
UPF3A-201ENST00000351487 ZNF833PQ6ZTB9 187 aa18.09■□□□□ 0.49
UPF3A-201ENST00000351487 CISD2Q8N5K1 135 aaKnown RBP18.09■□□□□ 0.49
UPF3A-201ENST00000351487 OR10D4PQ8NGN7 298 aa18.09■□□□□ 0.49
UPF3A-201ENST00000351487 DERL1Q9BUN8 251 aa18.09■□□□□ 0.49
UPF3A-201ENST00000351487 PLEKHA3Q9HB20 300 aa18.09■□□□□ 0.49
UPF3A-201ENST00000351487 J3QR06 171 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 IGKV1-16P04430 117 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 MYOD1P15172 320 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 RHOBP62745 196 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 PRR20EP86478 221 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 PRR20CP86479 221 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 PRR20DP86480 221 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 PRR20BP86481 221 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 PRR20AP86496 221 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 WFDC8Q8IUA0 241 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 PCGF1Q9BSM1 259 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 BET1LQ9NYM9 111 aa18.08■□□□□ 0.49
UPF3A-201ENST00000351487 SLC25A10Q9UBX3 287 aaPredicted RBP18.08■□□□□ 0.49
UPF3A-201ENST00000351487 A0A1W2PPQ1 181 aa18.08■□□□□ 0.48
UPF3A-201ENST00000351487 OR4A8P0C604 315 aa18.08■□□□□ 0.48
UPF3A-201ENST00000351487 NDUFB7P17568 137 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms