RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 RPL8P62917 257 aaKnown RBP10.23□□□□□ -0.77
SMAD9-201ENST00000350148 Q56UQ5 140 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 ABHD12Q8N2K0 398 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 OR4A5Q8NH83 315 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 OR2T6Q8NHC8 308 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 RBKSQ9H477 322 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 PEF1Q9UBV8 284 aaKnown RBP10.23□□□□□ -0.77
SMAD9-201ENST00000350148 PROB1E7EW31 1015 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 RBFOX2O43251 390 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMAD9-201ENST00000350148 IGHV3-7P01780 117 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 FAM106CPP0CH98 169 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 ARF6P62330 175 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 SRSF6Q13247 344 aaKnown RBP10.23□□□□□ -0.77
SMAD9-201ENST00000350148 ZNF737O75373 536 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 ATP6V0CP27449 155 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 TMEM204Q9BSN7 226 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 A0A0G2JNJ9 132 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 MARCH11A6NNE9 402 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 FAM90A9PA6NNJ1 464 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 LINC00614P0C842 121 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 PDPNQ86YL7 162 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 OR10W1Q8NGF6 305 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 OR1P1Q8NH06 330 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 PLPPR1Q8TBJ4 325 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 TMEM140Q9NV12 185 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 Q9UFV3 132 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 GRAMD2BQ96HH9 432 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 MAP1LC3CQ9BXW4 147 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 ATXN7O15265 892 aaPredicted RBP10.22□□□□□ -0.77
SMAD9-201ENST00000350148 HERPUD1Q15011 391 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 TNFRSF14Q92956 283 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 ANAPC16Q96DE5 110 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 NDUFAF3Q9BU61 184 aa10.22□□□□□ -0.77
SMAD9-201ENST00000350148 IGKV1-27A0A075B6S5 117 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.21□□□□□ -0.77
SMAD9-201ENST00000350148 RBP4P02753 201 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 TRGC2P03986 189 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 CD1BP29016 333 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 ZNF343Q6P1L6 599 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 PCSK4Q6UW60 755 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 VAX2Q9UIW0 290 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 IGLV3-1P01715 115 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 IGHV1-46P01743 117 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 BSXQ3C1V8 233 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 OR13A1Q8NGR1 328 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 AAMDCQ9H7C9 122 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 NAT8Q9UHE5 227 aa10.21□□□□□ -0.77
SMAD9-201ENST00000350148 KBTBD11O94819 623 aa10.21□□□□□ -0.78
SMAD9-201ENST00000350148 NAPSAO96009 420 aa10.21□□□□□ -0.78
SMAD9-201ENST00000350148 SSTR5P35346 364 aa10.21□□□□□ -0.78
SMAD9-201ENST00000350148 CKS1BP61024 79 aa10.21□□□□□ -0.78
SMAD9-201ENST00000350148 MMDQ15546 238 aa10.21□□□□□ -0.78
SMAD9-201ENST00000350148 ZNRF1Q8ND25 227 aa10.21□□□□□ -0.78
SMAD9-201ENST00000350148 HSPB9Q9BQS6 159 aa10.21□□□□□ -0.78
SMAD9-201ENST00000350148 FREM3P0C091 2139 aa10.21□□□□□ -0.78
SMAD9-201ENST00000350148 C18orf12Q96KH6 178 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 NPIPB11E5RHQ5 1161 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 H3BQ15 152 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 CXorf1O96002 111 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 KIF26BQ2KJY2 2108 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 KHDC3LQ587J8 217 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 PERPQ96FX8 193 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 PSMG3Q9BT73 122 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-201ENST00000350148 C19orf24Q9BVV8 132 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 RPEL1Q2QD12 228 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 LDLRAD2Q5SZI1 272 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 S1PR2O95136 353 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 CXorf66Q5JRM2 361 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-201ENST00000350148 MAP1BP46821 2468 aaKnown RBP10.2□□□□□ -0.78
SMAD9-201ENST00000350148 A0A1W2PPE3 182 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 SPINK9Q5DT21 86 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 ZNF324BQ6AW86 544 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-201ENST00000350148 ZNF474Q6S9Z5 364 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-201ENST00000350148 SLC35E3Q7Z769 313 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 CCL19Q99731 98 aa10.2□□□□□ -0.78
SMAD9-201ENST00000350148 SPINK4O60575 86 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 ANAPC10Q9UM13 185 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 DLEU1O43261 78 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 DNM1P46Q6ZS02 220 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 MEGF9Q9H1U4 602 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 PRSS47A8MTI9 375 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 MDKP21741 143 aaPredicted RBP10.19□□□□□ -0.78
SMAD9-201ENST00000350148 SMAGPQ0VAQ4 97 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 PMCHL1Q16048 86 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 COX19Q49B96 90 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 Q8WTZ3 238 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 RAB37Q96AX2 223 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 COA4Q9NYJ1 87 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 FAM3BP58499 235 aaPredicted RBP10.19□□□□□ -0.78
SMAD9-201ENST00000350148 C10orf126Q8N4M7 172 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 GINS3Q9BRX5 216 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 TCF19Q9Y242 345 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 AUP1Q9Y679 476 aa10.19□□□□□ -0.78
SMAD9-201ENST00000350148 NUTF2P61970 127 aaKnown RBP10.18□□□□□ -0.78
SMAD9-201ENST00000350148 Q6ZSR3 168 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 SSBP3Q9BWW4 388 aaPredicted RBP10.18□□□□□ -0.78
SMAD9-201ENST00000350148 SLC25A22Q9H936 323 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 WISP1O95388 367 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 HIST1H1EP10412 219 aaKnown RBP10.18□□□□□ -0.78
SMAD9-201ENST00000350148 TAF15Q92804 592 aaKnown RBP eCLIP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms