RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 SEC14L6B5MCN3 397 aa11□□□□□ -0.65
UBA3-201ENST00000349511 FAM90A26D6RGX4 464 aa11□□□□□ -0.65
UBA3-201ENST00000349511 CLDN1O95832 211 aa11□□□□□ -0.65
UBA3-201ENST00000349511 TRGC1P0CF51 173 aa11□□□□□ -0.65
UBA3-201ENST00000349511 ZNF134P52741 427 aa11□□□□□ -0.65
UBA3-201ENST00000349511 LRRC10Q5BKY1 277 aa11□□□□□ -0.65
UBA3-201ENST00000349511 OR8G2PQ6IF36 304 aa11□□□□□ -0.65
UBA3-201ENST00000349511 TMEM14EPQ6UXP3 125 aa11□□□□□ -0.65
UBA3-201ENST00000349511 ABHD5Q8WTS1 349 aa11□□□□□ -0.65
UBA3-201ENST00000349511 CSMD1Q96PZ7 3565 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 KBTBD11-OT1A0A1B0GTJ5 212 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 RNF212BA8MTL3 300 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 IFNA1P01562 189 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 IGKV1D-33P01593 117 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 IGKV1-33P01594 117 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 CGB3P0DN86 165 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 CGB7P0DN87 165 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 LOXL3P58215 753 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 CR1LQ2VPA4 569 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 MORN2Q502X0 79 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 PRAMEF5Q5TYX0 476 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 GFI1BQ5VTD9 330 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 TRAT1Q6PIZ9 186 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 FRZBQ92765 325 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 C5orf30Q96GV9 206 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 SLC39A9Q9NUM3 307 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 CLN8Q9UBY8 286 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 DMRT1Q9Y5R6 373 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 SLC31A2O15432 143 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 RAMP3O60896 148 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 HTD2P86397 168 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 TNFRSF9Q07011 255 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 HNF4GQ14541 408 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 OR2B11Q5JQS5 317 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 WDR25Q64LD2 544 aaPredicted RBP10.99□□□□□ -0.65
UBA3-201ENST00000349511 TMEM200BQ69YZ2 307 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 CDPF1Q6NVV7 123 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 HIST3H2BBQ8N257 126 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 ZNF645Q8N7E2 425 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 OR10D4PQ8NGN7 298 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 LHX4Q969G2 390 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 SSX3Q99909 188 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 ZNRD1Q9P1U0 126 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 TIMM9Q9Y5J7 89 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 TENM4Q6N022 2769 aa10.99□□□□□ -0.65
UBA3-201ENST00000349511 hADV38S2A0JD32 116 aa10.98□□□□□ -0.65
UBA3-201ENST00000349511 RD3LP0DJH9 198 aa10.98□□□□□ -0.65
UBA3-201ENST00000349511 G6PCP35575 357 aa10.98□□□□□ -0.65
UBA3-201ENST00000349511 GNG10P50151 68 aa10.98□□□□□ -0.65
UBA3-201ENST00000349511 RPL30P62888 115 aaKnown RBP10.98□□□□□ -0.65
UBA3-201ENST00000349511 PRB3Q04118 309 aaPredicted RBP10.98□□□□□ -0.65
UBA3-201ENST00000349511 ZNF816Q0VGE8 651 aaPredicted RBP10.98□□□□□ -0.65
UBA3-201ENST00000349511 PDZD11Q5EBL8 140 aa10.98□□□□□ -0.65
UBA3-201ENST00000349511 LURAP1LQ8IV03 231 aa10.98□□□□□ -0.65
UBA3-201ENST00000349511 RPP25LQ8N5L8 163 aaKnown RBP10.98□□□□□ -0.65
UBA3-201ENST00000349511 AGMATQ9BSE5 352 aa10.98□□□□□ -0.65
UBA3-201ENST00000349511 GPR61Q9BZJ8 451 aa10.98□□□□□ -0.65
UBA3-201ENST00000349511 HSPB7Q9UBY9 170 aa10.98□□□□□ -0.65
UBA3-201ENST00000349511 ELOA3CA0A087WX78 387 aaPredicted RBP10.97□□□□□ -0.65
UBA3-201ENST00000349511 PPP1R2P9O14990 202 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 KRASP01116 189 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 DLX1P56177 255 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 CD81P60033 236 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 ACSM6Q6P461 480 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 CENPVQ7Z7K6 275 aaPredicted RBP10.97□□□□□ -0.65
UBA3-201ENST00000349511 ZNF383Q8NA42 475 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 NEU4Q8WWR8 484 aaPredicted RBP10.97□□□□□ -0.65
UBA3-201ENST00000349511 CTDSP1Q9GZU7 261 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 ZMAT5Q9UDW3 170 aaKnown RBP10.97□□□□□ -0.65
UBA3-201ENST00000349511 F2RL2O00254 374 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 HMGB3O15347 200 aaKnown RBP10.97□□□□□ -0.65
UBA3-201ENST00000349511 TGOLN2O43493 480 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 COL8A1P27658 744 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 PMS2P11Q13670 270 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 Q3ZCU0 254 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 ZBTB34Q8NCN2 500 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 KAAG1Q9UBP8 84 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 NAT8Q9UHE5 227 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 JPT1Q9UK76 154 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 LINC00312Q9Y6C7 94 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 FBN2P35556 2912 aa10.97□□□□□ -0.65
UBA3-201ENST00000349511 USP9YO00507 2555 aaPredicted RBP10.96□□□□□ -0.65
UBA3-201ENST00000349511 TRBV24-1A0A075B6N3 115 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 PHOX2AO14813 284 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 YPEL1O60688 119 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 OPN1MWP04001 364 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 P0C879 139 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 OPN1MW2P0DN77 364 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 OPN1MW3P0DN78 364 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 EIF4EBP1Q13541 118 aaPredicted RBP10.96□□□□□ -0.65
UBA3-201ENST00000349511 MSMO1Q15800 293 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 RPL39P5Q59GN2 51 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 NRGNQ92686 78 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 YPEL2Q96QA6 119 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 GFOD1Q9NXC2 390 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 IDI2-AS1Q9NZ38 188 aa10.96□□□□□ -0.65
UBA3-201ENST00000349511 ZNF729A6NN14 1252 aaPredicted RBP10.96□□□□□ -0.66
UBA3-201ENST00000349511 PMS2P5A8MQ11 134 aa10.96□□□□□ -0.66
UBA3-201ENST00000349511 S1PR2O95136 353 aa10.96□□□□□ -0.66
UBA3-201ENST00000349511 MDKP21741 143 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms