RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 TRAV5A0A0B4J249 113 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 LMX1BO60663 402 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 SNCGO76070 127 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 NAPSAO96009 420 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 TMEM92Q6UXU6 159 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 OSR1Q8TAX0 266 aaPredicted RBP10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 IL36BQ9NZH7 164 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 FABP5P3A8MUU1 101 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 WNT2P09544 360 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 ZNF501Q96CX3 271 aaPredicted RBP10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 VGLL1Q99990 258 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 NXF5Q9H1B4 397 aaKnown RBP10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 FANCMQ8IYD8 2048 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 H0YJW9 148 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 H3BMG7 143 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 CCDC179H3BU77 68 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 MT-CO3P00414 261 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 TNFP01375 233 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 SRD5A2P31213 254 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 NMUP48645 174 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 ZNF121P58317 390 aaPredicted RBP10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 EBLN2Q6P2I7 272 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 MYO7BQ6PIF6 2116 aa10.34□□□□□ -0.75
CTNNB1-201ENST00000349496 MFSD12Q6NUT3 480 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 Q6ZS52 159 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 BMFQ96LC9 184 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 GCM1Q9NP62 436 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 KCNIP2Q9NS61 270 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 MAP1BP46821 2468 aaKnown RBP10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 KIR2DS5A0A0G2JLQ3 304 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 A0A0G2JNG1 304 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 A0A1W2PQF6 199 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 H0YGG7 62 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 CXorf1O96002 111 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 FCGR2BP31994 310 aaPredicted RBP10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 KIR2DL2P43627 348 aaPredicted RBP10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 TMEM187Q14656 261 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 KIR2DS5Q14953 304 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 DIDO1Q9BTC0 2240 aaKnown RBP10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 SDK2Q58EX2 2172 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 FOXH1O75593 365 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 KIR2DL1P43626 348 aaPredicted RBP10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 OR3A4PP47883 348 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 EMDP50402 254 aa10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 RPS21P63220 83 aaKnown RBP10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 CSDC2Q9Y534 153 aaKnown RBP10.33□□□□□ -0.76
CTNNB1-201ENST00000349496 WIPF3A6NGB9 483 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 HLA-DQA1P01909 254 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 FRMD6-AS1P0C7T7 363 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 COX5AP20674 150 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 CD38P28907 300 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 SERF2P84101 59 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 FXYD3Q14802 87 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 RTL8BQ17RB0 113 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 C1orf53Q5VUE5 145 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 AMTNQ6UX39 209 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 OR13H1Q8NG92 308 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 C2orf16Q68DN1 1984 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 FAM186AA6NE01 2351 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 TRBV9A0A0B4J1U6 114 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 CTXND1A0A1B0GTU2 59 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 MLNRO43193 412 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 FAM69BQ5VUD6 431 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 LRRC25Q8N386 305 aaPredicted RBP10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 DDIT4LQ96D03 193 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 TM2D1Q9BX74 207 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 CD300LBA8K4G0 201 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 WISP1O95388 367 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 CSRP1P21291 193 aaKnown RBP10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 INSL3P51460 131 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 RPS16P62249 146 aaKnown RBP10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 TIGITQ495A1 244 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 LINC00346Q8IVM7 164 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 OR1L8Q8NGR8 309 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 SDF2Q99470 211 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 FAM173AQ9BQD7 235 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 PSENENQ9NZ42 101 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 HEBP2Q9Y5Z4 205 aa10.32□□□□□ -0.76
CTNNB1-201ENST00000349496 ESPL1Q14674 2120 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 ZNF726P1Q15940 193 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 FAM166AQ6J272 317 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 F8W1H4 67 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 ATP5G3P48201 142 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 Q6ZSR6 202 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 TTC9CQ8N5M4 171 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 OTOSQ8NHW6 89 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 ADTRPQ96IZ2 230 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 HDHD3Q9BSH5 251 aaPredicted RBP10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 MAP1LC3AQ9H492 121 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 NHP2Q9NX24 153 aaKnown RBP10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 KIAA1549LQ6ZVL6 1849 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 NUDT14O95848 222 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 IGFBP7Q16270 282 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 NAT6Q93015 286 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 MS4A6AQ9H2W1 248 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 SAP30LQ9HAJ7 183 aa10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 SPANXB1Q9NS25 103 aaPredicted RBP10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 LSM4Q9Y4Z0 139 aaKnown RBP10.31□□□□□ -0.76
CTNNB1-201ENST00000349496 SH2D7A6NKC9 451 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms