RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 KCNIP4Q6PIL6 250 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 MISP3Q96FF7 219 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 GRIFINA4D1Z8 144 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 A8MWP6 167 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 MGST3O14880 152 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 YPEL1O60688 119 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 AARDQ4LEZ3 155 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 DNLZQ5SXM8 178 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 TMEM144Q7Z5S9 345 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 YPEL2Q96QA6 119 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 IMMP2LQ96T52 175 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 CALYQ9NYX4 217 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 JPT1Q9UK76 154 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 GVINP1Q7Z2Y8 2422 aa14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 PRR33A8MZF0 331 aa14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 TMPRSS2O15393 492 aa14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 ACTL6BO94805 426 aa14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 IL6RP08887 468 aaPredicted RBP14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 SSX2Q16385 188 aa14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 BHLHA15Q7RTS1 189 aaPredicted RBP14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 RAB1CQ92928 201 aa14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 SNRNP40Q96DI7 357 aaKnown RBP14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 M0R1B8 84 aa14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 ELOVL5Q9NYP7 299 aa14.89□□□□□ -0.03
PTP4A3-202ENST00000349124 F6UZH7 168 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 CGAP01215 116 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 EFNB3Q15768 340 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 C17orf58Q2M2W7 97 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 ITLN1Q8WWA0 313 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 DDB2Q92466 427 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 SLC25A15Q9Y619 301 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 DSCAMO60469 2012 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 SAA2-SAA4A0A096LPE2 208 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 K7EN84 100 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 MMP23AO75900 390 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 SAA2P0DJI9 122 aaPredicted RBP14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 MLANAQ16655 118 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 STPG3Q8N7X2 389 aa14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 C1orf162Q8NEQ5 155 aaPredicted RBP14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 LSM4Q9Y4Z0 139 aaKnown RBP14.88□□□□□ -0.03
PTP4A3-202ENST00000349124 CA2P00918 260 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 PAX1P15863 534 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 IGFBP2P18065 325 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 GATA2P23769 480 aaPredicted RBP14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 GNG10P50151 68 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 RPL31P62899 125 aaKnown RBP14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 OR4A47Q6IF82 309 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 GBGT1Q8N5D6 347 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 PROCRQ9UNN8 238 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 SPAARA0A1B0GVQ0 90 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 CXorf1O96002 111 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 FOSL1P15407 271 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 GCHFRP30047 84 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 RPP30P78346 268 aaKnown RBP14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 C22orf34Q6ZV56 151 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 LYG1Q8N1E2 194 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 OR4P4Q8NGL7 312 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 TMEM18Q96B42 140 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 SARAFQ96BY9 339 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 NPVFQ9HCQ7 196 aa14.87□□□□□ -0.03
PTP4A3-202ENST00000349124 F2RL2O00254 374 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 ADMP35318 185 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 TIMP3P35625 211 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 TMPRSS3P57727 454 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 LCN2P80188 198 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 OR5I1Q13606 314 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 TRAT1Q6PIZ9 186 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 DCAF16Q9NXF7 216 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 MDFIC2A0A1B0GVS7 189 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 MPDU1O75352 247 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 CGB3P0DN86 165 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 CGB7P0DN87 165 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 CBLN1P23435 193 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 OR52E5Q8NH55 327 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 MKRN2OSH3BPM6 223 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 FOXL1Q12952 345 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 CR1LQ2VPA4 569 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 TMEM249Q2WGJ8 235 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 DEFB109BQ30KR1 87 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 TEX38Q6PEX7 206 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 MIR17HGQ75NE6 70 aa14.86□□□□□ -0.03
PTP4A3-202ENST00000349124 A0A1B0GWJ7 208 aa14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 NPY1RP25929 384 aa14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 PAX5Q02548 391 aa14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 ZNF474Q6S9Z5 364 aaPredicted RBP14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 KALRNO60229 2985 aa14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 C15orf61A6NNL5 157 aa14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 SCGB1D1O95968 90 aa14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 GCGP01275 180 aa14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 TEPPQ6URK8 271 aa14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 SLC24A4Q8NFF2 622 aa14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 OR10G8Q8NGN5 311 aa14.85□□□□□ -0.03
PTP4A3-202ENST00000349124 ATMQ13315 3056 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 TRAV17A0A0B4J275 112 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 SRRM4A7MD48 611 aaKnown RBP14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 IGKV1-16P04430 117 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 CD99P14209 185 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 USF2Q15853 346 aaPredicted RBP14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 LOXL4Q96JB6 756 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 FAM90A9PA6NNJ1 464 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms