RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 UBQLN2Q9UHD9 624 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 LINC00527Q9UJ94 153 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 TET2Q6N021 2002 aaPredicted RBP12.71□□□□□ -0.37
RAB5C-201ENST00000346213 RAB7AP51149 207 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 CCDC144NLQ6NUI1 221 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 MOB3BQ86TA1 216 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 OR8H3Q8N146 312 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 GPHA2Q96T91 129 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 IFI27L2Q9H2X8 130 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 OR2S2Q9NQN1 319 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 TNFSF12O43508 249 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 FBXO24O75426 580 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 TMEM11P17152 192 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 CTAG1AP78358 180 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 NSUN5P1Q3KNT7 163 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 FAM122CQ6P4D5 195 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 C16orf82Q7Z2V1 217 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 ZNF645Q8N7E2 425 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 OR1S1Q8NH92 325 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 RBPMSQ93062 196 aaKnown RBP12.7□□□□□ -0.38
RAB5C-201ENST00000346213 ZNF251Q9BRH9 671 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 MRPL20Q9BYC9 149 aaKnown RBP12.7□□□□□ -0.38
RAB5C-201ENST00000346213 ZFP57Q9NU63 452 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 OR5AC2Q9NZP5 309 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 MOB4Q9Y3A3 225 aa12.7□□□□□ -0.38
RAB5C-201ENST00000346213 KANTRA0A1W2PQU2 76 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 ST8SIA5O15466 376 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 BCL2L11O43521 198 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 PROP1O75360 226 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 RLN2P04090 185 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 CNTFRP26992 372 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 NUP62P37198 522 aaPredicted RBP12.69□□□□□ -0.38
RAB5C-201ENST00000346213 F2RL1P55085 397 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 LINC00205P59089 165 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 S100A10P60903 97 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 HES1Q14469 280 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 SMCO1Q147U7 214 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 Q8N9W7 124 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 SPIN2AQ99865 258 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 SPIN2BQ9BPZ2 258 aa12.69□□□□□ -0.38
RAB5C-201ENST00000346213 DEDDO75618 318 aa12.68□□□□□ -0.38
RAB5C-201ENST00000346213 GAPDHP04406 335 aaKnown RBP12.68□□□□□ -0.38
RAB5C-201ENST00000346213 VDAC1P21796 283 aa12.68□□□□□ -0.38
RAB5C-201ENST00000346213 Q3ZCU0 254 aa12.68□□□□□ -0.38
RAB5C-201ENST00000346213 C18orf65Q6ZTR6 163 aa12.68□□□□□ -0.38
RAB5C-201ENST00000346213 OR4D5Q8NGN0 318 aa12.68□□□□□ -0.38
RAB5C-201ENST00000346213 RRNAD1Q96FB5 475 aaKnown RBP12.68□□□□□ -0.38
RAB5C-201ENST00000346213 AQP10Q96PS8 301 aa12.68□□□□□ -0.38
RAB5C-201ENST00000346213 HSPB9Q9BQS6 159 aa12.68□□□□□ -0.38
RAB5C-201ENST00000346213 ABHD14AQ9BUJ0 271 aa12.68□□□□□ -0.38
RAB5C-201ENST00000346213 RAB9BQ9NP90 201 aa12.68□□□□□ -0.38
RAB5C-201ENST00000346213 JPT1Q9UK76 154 aa12.68□□□□□ -0.38
RAB5C-201ENST00000346213 SAA2-SAA4A0A096LPE2 208 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 A0A1W2PRX2 142 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 MBPP02686 304 aaPredicted RBP12.67□□□□□ -0.38
RAB5C-201ENST00000346213 FAM106CPP0CH98 169 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 SAA2P0DJI9 122 aaPredicted RBP12.67□□□□□ -0.38
RAB5C-201ENST00000346213 NMSQ5H8A3 153 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 C9orf152Q5JTZ5 239 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 OR5AU1Q8NGC0 362 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 OR51H1Q8NH63 302 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 C5orf30Q96GV9 206 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 LIN7CQ9NUP9 197 aaKnown RBP12.67□□□□□ -0.38
RAB5C-201ENST00000346213 G3V4G9 280 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 K7EPK0 472 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 YPEL1O60688 119 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 SERPINE2P07093 398 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 DEFA6Q01524 100 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 EIF4EBP1Q13541 118 aaPredicted RBP12.67□□□□□ -0.38
RAB5C-201ENST00000346213 RPL39P5Q59GN2 51 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 CLLU1Q5K131 121 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 ZNF329Q86UD4 541 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 FAM71E2Q8N5Q1 922 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 EDARADDQ8WWZ3 215 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 YPEL2Q96QA6 119 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 NABP2Q9BQ15 211 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 AGMATQ9BSE5 352 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 OR2D2Q9H210 308 aa12.67□□□□□ -0.38
RAB5C-201ENST00000346213 LSM5Q9Y4Y9 91 aaKnown RBP12.67□□□□□ -0.38
RAB5C-201ENST00000346213 ST8SIA3O43173 380 aa12.66□□□□□ -0.38
RAB5C-201ENST00000346213 ZNF833PQ6ZTB9 187 aa12.66□□□□□ -0.38
RAB5C-201ENST00000346213 TGIF2LXQ8IUE1 241 aa12.66□□□□□ -0.38
RAB5C-201ENST00000346213 SCARB1Q8WTV0 552 aa12.66□□□□□ -0.38
RAB5C-201ENST00000346213 ST8SIA2Q92186 375 aa12.66□□□□□ -0.38
RAB5C-201ENST00000346213 ABHD14BQ96IU4 210 aa12.66□□□□□ -0.38
RAB5C-201ENST00000346213 RNF150Q9ULK6 438 aa12.66□□□□□ -0.38
RAB5C-201ENST00000346213 RPS10-NUDT3A0A1W2PQS6 291 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 MSGN1A6NI15 193 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 E5RGE8 158 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 ITGB1BP1O14713 200 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 SCGB1D2O95969 90 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 SLC25A6P12236 298 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 CD1BP29016 333 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 ARHGDIBP52566 201 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 TMEM30BQ3MIR4 351 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 ARSJQ5FYB0 599 aaPredicted RBP12.65□□□□□ -0.38
RAB5C-201ENST00000346213 LCNL1Q6ZST4 164 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 FOXRED2Q8IWF2 684 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 TCTEX1D1Q8N7M0 179 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 LSM10Q969L4 123 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms