RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 TAS2R31P59538 309 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 CTF1Q16619 201 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 RPEL1Q2QD12 228 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 ZNF2Q9BSG1 426 aaPredicted RBP12.91□□□□□ -0.34
BRCC3-202ENST00000340647 IFT46Q9NQC8 304 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 COMMD3Q9UBI1 195 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 SACSQ9NZJ4 4579 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 EPPK1P58107 5090 aaKnown RBP12.9□□□□□ -0.34
BRCC3-202ENST00000340647 HPGDSO60760 199 aa12.9□□□□□ -0.34
BRCC3-202ENST00000340647 RPA2P15927 270 aa12.9□□□□□ -0.34
BRCC3-202ENST00000340647 PRSS3P35030 304 aa12.9□□□□□ -0.34
BRCC3-202ENST00000340647 SLC25A42Q86VD7 318 aa12.9□□□□□ -0.34
BRCC3-202ENST00000340647 OR10W1Q8NGF6 305 aa12.9□□□□□ -0.34
BRCC3-202ENST00000340647 OR4A5Q8NH83 315 aa12.9□□□□□ -0.34
BRCC3-202ENST00000340647 TM2D3Q9BRN9 247 aa12.9□□□□□ -0.34
BRCC3-202ENST00000340647 PLEKHA2Q9HB19 425 aa12.9□□□□□ -0.34
BRCC3-202ENST00000340647 VCX3AQ9NNX9 186 aa12.9□□□□□ -0.34
BRCC3-202ENST00000340647 TMEM140Q9NV12 185 aa12.9□□□□□ -0.34
BRCC3-202ENST00000340647 MFSD2BA6NFX1 497 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 ZNF785A8K8V0 405 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 OR2C1O95371 312 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 APOA1P02647 267 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 RLN1P04808 185 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 NQO2P16083 231 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 HLA-DMAP28067 261 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 HRH1P35367 487 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 FCAMRQ8WWV6 532 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 CMTM3Q96MX0 182 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 RCHY1Q96PM5 261 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 STARD9Q9P2P6 4700 aa12.89□□□□□ -0.35
BRCC3-202ENST00000340647 DBX1A6NMT0 343 aa12.88□□□□□ -0.35
BRCC3-202ENST00000340647 GABARAPO95166 117 aa12.88□□□□□ -0.35
BRCC3-202ENST00000340647 MFAP2P55001 183 aa12.88□□□□□ -0.35
BRCC3-202ENST00000340647 HERV-K104P61576 105 aa12.88□□□□□ -0.35
BRCC3-202ENST00000340647 CATR1Q13166 79 aa12.88□□□□□ -0.35
BRCC3-202ENST00000340647 AADACL3Q5VUY0 350 aa12.88□□□□□ -0.35
BRCC3-202ENST00000340647 CLEC19AQ6UXS0 136 aa12.88□□□□□ -0.35
BRCC3-202ENST00000340647 OR5H2Q8NGV7 314 aa12.88□□□□□ -0.35
BRCC3-202ENST00000340647 ZNF414Q96IQ9 312 aa12.88□□□□□ -0.35
BRCC3-202ENST00000340647 HRASLSQ9HDD0 168 aa12.88□□□□□ -0.35
BRCC3-202ENST00000340647 TENM2Q9NT68 2774 aa12.87□□□□□ -0.35
BRCC3-202ENST00000340647 TEX50A0A1B0GTY4 177 aa12.87□□□□□ -0.35
BRCC3-202ENST00000340647 C2orf70A6NJV1 201 aa12.87□□□□□ -0.35
BRCC3-202ENST00000340647 F2RP25116 425 aa12.87□□□□□ -0.35
BRCC3-202ENST00000340647 TAS2R46P59540 309 aa12.87□□□□□ -0.35
BRCC3-202ENST00000340647 WT1-ASQ06250 92 aa12.87□□□□□ -0.35
BRCC3-202ENST00000340647 DEFB114Q30KQ6 69 aa12.87□□□□□ -0.35
BRCC3-202ENST00000340647 CD300EQ496F6 205 aaPredicted RBP12.87□□□□□ -0.35
BRCC3-202ENST00000340647 COMMD9Q9P000 198 aa12.87□□□□□ -0.35
BRCC3-202ENST00000340647 SELENOKQ9Y6D0 94 aa12.87□□□□□ -0.35
BRCC3-202ENST00000340647 BIRC6Q9NR09 4857 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 LGALS9O00182 355 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 GGCTO75223 188 aaKnown RBP12.86□□□□□ -0.35
BRCC3-202ENST00000340647 IGKV1-39P01597 117 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 IGKV1D-39P04432 117 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 FGF2P09038 288 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 LPAR6P43657 344 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 LINC00322Q6ZN03 302 aaPredicted RBP12.86□□□□□ -0.35
BRCC3-202ENST00000340647 GPHB5Q86YW7 130 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 SNX29P2Q8IUI4 249 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 OR6F1Q8NGZ6 308 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 CACNG8Q8WXS5 425 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 DGCR14Q96DF8 476 aaKnown RBP12.86□□□□□ -0.35
BRCC3-202ENST00000340647 NDUFA4L2Q9NRX3 87 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 NSG2Q9Y328 171 aa12.86□□□□□ -0.35
BRCC3-202ENST00000340647 TMEM213A2RRL7 107 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 DPPA5A6NC42 116 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 H0Y980 276 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 GPR31O00270 319 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 FOLR2P14207 255 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 G6PCP35575 357 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 ALDH3B2P48448 385 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 TATDN3Q17R31 274 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 UNQ9165/PRO28630Q6UXU0 137 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 CADM3Q8N126 398 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 Q8N402 240 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 ZNF502Q8TBZ5 544 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 CD300LFQ8TDQ1 290 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 AIFM2Q9BRQ8 373 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 SCPEP1Q9HB40 452 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 ZC4H2Q9NQZ6 224 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 PEMTQ9UBM1 199 aa12.85□□□□□ -0.35
BRCC3-202ENST00000340647 LYSTQ99698 3801 aa12.84□□□□□ -0.35
BRCC3-202ENST00000340647 F8W735 103 aaPredicted RBP12.84□□□□□ -0.35
BRCC3-202ENST00000340647 KRASP01116 189 aa12.84□□□□□ -0.35
BRCC3-202ENST00000340647 CD7P09564 240 aa12.84□□□□□ -0.35
BRCC3-202ENST00000340647 RORCP51449 518 aa12.84□□□□□ -0.35
BRCC3-202ENST00000340647 PHLDA2Q53GA4 152 aa12.84□□□□□ -0.35
BRCC3-202ENST00000340647 DMBX1Q8NFW5 382 aa12.84□□□□□ -0.35
BRCC3-202ENST00000340647 ABHD1Q96SE0 405 aa12.84□□□□□ -0.35
BRCC3-202ENST00000340647 SRSF8Q9BRL6 282 aaKnown RBP12.84□□□□□ -0.35
BRCC3-202ENST00000340647 QTRT1Q9BXR0 403 aaKnown RBP12.84□□□□□ -0.35
BRCC3-202ENST00000340647 MIXL1Q9H2W2 232 aa12.84□□□□□ -0.35
BRCC3-202ENST00000340647 KLK11Q9UBX7 282 aa12.84□□□□□ -0.35
BRCC3-202ENST00000340647 M0QYG6 137 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 CLEC3BP05452 202 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 SERPINE2P07093 398 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 HIST1H1BP16401 226 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms