RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 GSN-AS1Q9NRJ2 163 aa13.41□□□□□ -0.26
LITAF-201ENST00000339430 RNF7Q9UBF6 113 aa13.41□□□□□ -0.26
LITAF-201ENST00000339430 IGHV1-46P01743 117 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 GYPAP02724 150 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 MYOD1P15172 320 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 VDAC2P45880 294 aaPredicted RBP13.4□□□□□ -0.26
LITAF-201ENST00000339430 CDX1P47902 265 aaPredicted RBP13.4□□□□□ -0.26
LITAF-201ENST00000339430 LYG1Q8N1E2 194 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 FAM216BQ8N7L0 139 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 TMEM170AQ8WVE7 144 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 MS4A5Q9H3V2 200 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 GFOD1Q9NXC2 390 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 HIVEP3Q5T1R4 2406 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 TMEM250H0YL14 139 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 OPN1MWP04001 364 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 OPN1MW2P0DN77 364 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 OPN1MW3P0DN78 364 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 CGB3P0DN86 165 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 CGB7P0DN87 165 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 CD40P25942 277 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 TREML4Q6UXN2 200 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 DDB2Q92466 427 aa13.4□□□□□ -0.26
LITAF-201ENST00000339430 KBTBD11-OT1A0A1B0GTJ5 212 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 C11orf94C9JXX5 98 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 AARDQ4LEZ3 155 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 TCF23Q7RTU1 214 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 OR51G1Q8NGK1 321 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 OR4S2Q8NH73 311 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 CTDSP1Q9GZU7 261 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 ZNRD1Q9P1U0 126 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 MIOXQ9UGB7 285 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 TCF19Q9Y242 345 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 TRGV10A0A0A0MS01 117 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 A0A1W2PPV4 95 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 FAM90A9PA6NNJ1 464 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 LINC00587B1AMM8 73 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 RBFOX2O43251 390 aaKnown RBP eCLIP13.39□□□□□ -0.27
LITAF-201ENST00000339430 GRNP28799 593 aaKnown RBP13.39□□□□□ -0.27
LITAF-201ENST00000339430 RPP30P78346 268 aaKnown RBP13.39□□□□□ -0.27
LITAF-201ENST00000339430 CST9LP1Q5W188 147 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 RHOVQ96L33 236 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 GAFA1Q96PS6 74 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 MGST2Q99735 147 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 ELOVL1Q9BW60 279 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 ROS1P08922 2347 aa13.39□□□□□ -0.27
LITAF-201ENST00000339430 MMP23AO75900 390 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 SOD3P08294 240 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 NPPCP23582 126 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 ATP5G3P48201 142 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 SELENOVP59797 346 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 B2MP61769 119 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 FBXL19-AS1Q494R0 122 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 MIC13Q5XKP0 118 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 STUMQ69YW2 141 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 OR4A47Q6IF82 309 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 TMEM108Q6UXF1 575 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 OR13D1Q8NGV5 346 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 NEIL1Q96FI4 390 aaPredicted RBP13.38□□□□□ -0.27
LITAF-201ENST00000339430 BBC3Q96PG8 261 aaPredicted RBP13.38□□□□□ -0.27
LITAF-201ENST00000339430 GGACTQ9BVM4 153 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 HINT2Q9BX68 163 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 AURKAIP1Q9NWT8 199 aaPredicted RBP13.38□□□□□ -0.27
LITAF-201ENST00000339430 TRBV24-1A0A075B6N3 115 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 COL8A2P25067 703 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 RAB7AP51149 207 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 CTAG1AP78358 180 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 PDLIM3Q53GG5 364 aaPredicted RBP13.38□□□□□ -0.27
LITAF-201ENST00000339430 ZCCHC24Q8N2G6 241 aaKnown RBP13.38□□□□□ -0.27
LITAF-201ENST00000339430 ZNF383Q8NA42 475 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 OR52E5Q8NH55 327 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 FAM222BQ8WU58 562 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 SSMEM1Q8WWF3 244 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 RNASE6Q93091 150 aaKnown RBP13.38□□□□□ -0.27
LITAF-201ENST00000339430 GPR61Q9BZJ8 451 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 IL19Q9UHD0 177 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 GAB2Q9UQC2 676 aa13.38□□□□□ -0.27
LITAF-201ENST00000339430 DPRXA6NFQ7 191 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 PRSS46E5RG02 174 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 H7BYZ3 331 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 PRB1P04280 392 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 S100A2P29034 98 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 GATA4P43694 442 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 GALR1P47211 349 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 CCL8P80075 99 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 MRPS11P82912 194 aaKnown RBP13.37□□□□□ -0.27
LITAF-201ENST00000339430 DIRC2Q96SL1 478 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 GAR1Q9NY12 217 aaKnown RBP13.37□□□□□ -0.27
LITAF-201ENST00000339430 C15orf61A6NNL5 157 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 KIR2DS2P43631 304 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 BSPH1Q075Z2 132 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 SSX8Q7RTT4 187 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 TMEM204Q9BSN7 226 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 GGTLC1Q9BX51 225 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 PXMP4Q9Y6I8 212 aa13.37□□□□□ -0.27
LITAF-201ENST00000339430 SEC14L6B5MCN3 397 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 PFN1P07737 140 aaKnown RBP13.36□□□□□ -0.27
LITAF-201ENST00000339430 PYY3Q5JQD4 70 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 OR10D4PQ8NGN7 298 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 LINC01560Q8TB33 94 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 DERL1Q9BUN8 251 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms