RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 SMCO1Q147U7 214 aa10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 FXYD3Q14802 87 aa10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 C10orf55Q5SWW7 151 aa10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 THOC7Q6I9Y2 204 aaKnown RBP10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 FOXRED2Q8IWF2 684 aa10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 TAF15Q92804 592 aaKnown RBP eCLIP10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 OR10C1Q96KK4 312 aa10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 QTRT1Q9BXR0 403 aaKnown RBP10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 COMMD5Q9GZQ3 224 aa10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 MED28Q9H204 178 aa10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 FKBP11Q9NYL4 201 aa10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 FOXA2Q9Y261 457 aaPredicted RBP10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 OR51B2Q9Y5P1 312 aa10.85□□□□□ -0.67
TUBA1B-202ENST00000336023 C5orf51A6NDU8 294 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 LINC01548A6NM66 108 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 GOSR2O14653 212 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 IGHG2P01859 326 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 OPN1MWP04001 364 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 OPN1MW2P0DN77 364 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 OPN1MW3P0DN78 364 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 SLC25A6P12236 298 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 NDPQ00604 133 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 ZNF429Q86V71 674 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 LURAP1LQ8IV03 231 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 SPIN2AQ99865 258 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 SPIN2BQ9BPZ2 258 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 ZNF702PQ9H963 129 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 COA4Q9NYJ1 87 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 TEX50A0A1B0GTY4 177 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 E7EUB6 86 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 ST8SIA3O43173 380 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 SIX6O95475 246 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 IAH1Q2TAA2 248 aaPredicted RBP10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 GSG1LQ6UXU4 331 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 Q6ZSV7 163 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 SLC35E3Q7Z769 313 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 OR5M8Q8NGP6 311 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 OR1S1Q8NH92 325 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 GRPEL2Q8TAA5 225 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 SRSF12Q8WXF0 261 aaKnown RBP10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 ARPC1AQ92747 370 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 PARP11Q9NR21 331 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 MGAT4CQ9UBM8 478 aa10.84□□□□□ -0.67
TUBA1B-202ENST00000336023 KCNAB3O43448 404 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 PITX3O75364 302 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 TSPAN9O75954 239 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 IFNA17P01571 189 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 RPL27AP46776 148 aaKnown RBP10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 HSPE1P61604 102 aaKnown RBP10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 RRAS2P62070 204 aaPredicted RBP10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 FCN2Q15485 313 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 AARDQ4LEZ3 155 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 Q8N2B8 174 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 OR1L8Q8NGR8 309 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 OR5B3Q8NH48 314 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 ABHD5Q8WTS1 349 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 FAM103A1Q9BTL3 118 aaKnown RBP10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 GSKIPQ9P0R6 139 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 ZNF257Q9Y2Q1 563 aa10.83□□□□□ -0.68
TUBA1B-202ENST00000336023 A0A1B0GW64 132 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 MSGN1A6NI15 193 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 ATP6V0E1O15342 81 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 NXPH3O95157 252 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 EGR2P11161 476 aaPredicted RBP10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 CXCL3P19876 107 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 H2BFSP57053 126 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 ARSJQ5FYB0 599 aaPredicted RBP10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 CXorf66Q5JRM2 361 aaPredicted RBP10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 PRIMA1Q86XR5 153 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 ZBTB8BQ8NAP8 495 aaPredicted RBP10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 OR11H7Q8NGC8 314 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 C2orf50Q96LR7 162 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 FYTTD1Q96QD9 318 aaKnown RBP10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 PDCD10Q9BUL8 212 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 HINT2Q9BX68 163 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 NDUFA4L2Q9NRX3 87 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 FBXO7Q9Y3I1 522 aa10.82□□□□□ -0.68
TUBA1B-202ENST00000336023 A0A1B0GVG6 124 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 CGB1A6NKQ9 187 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 TRAPPC2P0DI81 140 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 TRAPPC2BP0DI82 140 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 SPCS3P61009 180 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 TMEM95Q3KNT9 176 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 SPINK9Q5DT21 86 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 OR4D5Q8NGN0 318 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 OR52E5Q8NH55 327 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 OR2T6Q8NHC8 308 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 SGMS2Q8NHU3 365 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 CACFD1Q9UGQ2 172 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 LINC00527Q9UJ94 153 aa10.81□□□□□ -0.68
TUBA1B-202ENST00000336023 hCG_2014768A0A024R1R8 64 aa10.8□□□□□ -0.68
TUBA1B-202ENST00000336023 HMX3A6NHT5 357 aa10.8□□□□□ -0.68
TUBA1B-202ENST00000336023 TEX22C9J3V5 150 aa10.8□□□□□ -0.68
TUBA1B-202ENST00000336023 AP4M1O00189 453 aa10.8□□□□□ -0.68
TUBA1B-202ENST00000336023 IGF1P05019 195 aa10.8□□□□□ -0.68
TUBA1B-202ENST00000336023 APELAP0DMC3 54 aa10.8□□□□□ -0.68
TUBA1B-202ENST00000336023 VDAC2P45880 294 aaPredicted RBP10.8□□□□□ -0.68
TUBA1B-202ENST00000336023 TNFRSF9Q07011 255 aa10.8□□□□□ -0.68
TUBA1B-202ENST00000336023 LFNGQ8NES3 379 aa10.8□□□□□ -0.68
TUBA1B-202ENST00000336023 OR10W1Q8NGF6 305 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms