RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 E9PLD3 99 aa7.2□□□□□ -1.26
TDP1-201ENST00000335725 C11orf98E9PRG8 122 aa7.2□□□□□ -1.26
TDP1-201ENST00000335725 SGCBQ16585 318 aa7.2□□□□□ -1.26
TDP1-201ENST00000335725 IBA57Q5T440 356 aaKnown RBP7.2□□□□□ -1.26
TDP1-201ENST00000335725 SLC35E4Q6ICL7 350 aa7.2□□□□□ -1.26
TDP1-201ENST00000335725 LINC00114Q6XXX2 140 aa7.2□□□□□ -1.26
TDP1-201ENST00000335725 SPEM1Q8N4L4 309 aa7.2□□□□□ -1.26
TDP1-201ENST00000335725 CNRIP1Q96F85 164 aaPredicted RBP7.2□□□□□ -1.26
TDP1-201ENST00000335725 SSUH2Q9Y2M2 353 aa7.2□□□□□ -1.26
TDP1-201ENST00000335725 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.2□□□□□ -1.26
TDP1-201ENST00000335725 DOCK3Q8IZD9 2030 aa7.2□□□□□ -1.26
TDP1-201ENST00000335725 PLXNB2O15031 1838 aa7.2□□□□□ -1.26
TDP1-201ENST00000335725 A0A0A6YYD5 115 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 A0A1B0GX51 115 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 C1orf105O95561 183 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 GLI4P10075 376 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 RPS27P42677 84 aaKnown RBP7.19□□□□□ -1.26
TDP1-201ENST00000335725 DIAPH2-AS1Q14236 149 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 ZNF474Q6S9Z5 364 aaPredicted RBP7.19□□□□□ -1.26
TDP1-201ENST00000335725 ACP7Q6ZNF0 438 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 FADS6Q8N9I5 356 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 TEX45Q8NA69 505 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 SSBP3Q9BWW4 388 aaPredicted RBP7.19□□□□□ -1.26
TDP1-201ENST00000335725 AKIRIN1Q9H9L7 192 aaPredicted RBP7.19□□□□□ -1.26
TDP1-201ENST00000335725 TRBV20-1A0A075B6N2 111 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 PRSS37A4D1T9 235 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 C15orf65H3BRN8 121 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 DNPH1O43598 174 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 CRYAAP02489 173 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 PLPP4Q5VZY2 271 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 PIP4P1Q86T03 277 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 STPG3Q8N7X2 389 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 WIPF2Q8TF74 440 aaPredicted RBP7.19□□□□□ -1.26
TDP1-201ENST00000335725 CDX2Q99626 313 aaPredicted RBP7.19□□□□□ -1.26
TDP1-201ENST00000335725 MSRB2Q9Y3D2 182 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 YTHDF2Q9Y5A9 579 aaKnown RBP7.19□□□□□ -1.26
TDP1-201ENST00000335725 V9GYV3 84 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 VWA8A3KMH1 1905 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 PSMG4Q5JS54 123 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 LINC01545Q5VT33 79 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 LYSMD4Q5XG99 296 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 FAM19A5Q7Z5A7 132 aaPredicted RBP7.19□□□□□ -1.26
TDP1-201ENST00000335725 LINC01465Q8N7H1 131 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 OR52N5Q8NH56 324 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 SPATA33Q96N06 139 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 OSTCQ9NRP0 149 aa7.19□□□□□ -1.26
TDP1-201ENST00000335725 EGR1P18146 543 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 CXCL12P48061 93 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 GUSBP1Q15486 140 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 PEAR1Q5VY43 1037 aaPredicted RBP7.18□□□□□ -1.26
TDP1-201ENST00000335725 RHBDD2Q6NTF9 364 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.18□□□□□ -1.26
TDP1-201ENST00000335725 SSX8Q7RTT4 187 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 SPACA3Q8IXA5 215 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 KIR3DL3Q8N743 410 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 TMEM178AQ8NBL3 297 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 OR10J6PQ8NGY7 276 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 LRRC29Q8WV35 223 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 RPEQ96AT9 228 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 ADAMTSL1Q8N6G6 1762 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 IZUMO1RA6ND01 250 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 C9JAW5 83 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 NUDT14O95848 222 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 CSN3P07498 182 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 C8orf89P0DMQ9 161 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 Q6ZS49 121 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 PSENENQ9NZ42 101 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 HIGD1AQ9Y241 93 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 PLXNA2O75051 1894 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 NLRC5Q86WI3 1866 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 H3BP45 60 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 SPINK4O60575 86 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 IGKV1D-33P01593 117 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 IGKV1-33P01594 117 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 ORM1P02763 201 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 FGF6P10767 208 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 RPL7P18124 248 aaKnown RBP7.18□□□□□ -1.26
TDP1-201ENST00000335725 GTF3C1Q12789 2109 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 H1FNTQ75WM6 255 aaPredicted RBP7.18□□□□□ -1.26
TDP1-201ENST00000335725 MARCH3Q86UD3 253 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 LOXL2Q9Y4K0 774 aa7.18□□□□□ -1.26
TDP1-201ENST00000335725 LOC102723996A0A087X1L8 192 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 FRMD6-AS1P0C7T7 363 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 OPRK1P41145 380 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 ASIPP42127 132 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 ATP5G3P48201 142 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 EIF3IQ13347 325 aaKnown RBP7.17□□□□□ -1.26
TDP1-201ENST00000335725 RTL8BQ17RB0 113 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 KIR2DL5BQ8NHK3 375 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 ZDHHC16Q969W1 377 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 PRTFDC1Q9NRG1 225 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 UBE2L5PA0A1B0GUS4 154 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 IGLV3-27P01718 113 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 CRYGBP07316 175 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 SP1P08047 785 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 ZNF688P0C7X2 276 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 RPS28P62857 69 aaKnown RBP7.17□□□□□ -1.26
TDP1-201ENST00000335725 LY6KQ17RY6 165 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 ZNF689Q96CS4 500 aaPredicted RBP7.17□□□□□ -1.26
TDP1-201ENST00000335725 PRO0461Q9UI25 63 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms