RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FAM90A24PP0C7X0 464 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 P2RY1P47900 373 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 ELOBQ15370 118 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 GPR157Q5UAW9 335 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 TMEM200BQ69YZ2 307 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 LINC00596Q86U02 117 aa13.11□□□□□ -0.31
PDGFB-201ENST00000331163 LIN7CQ9NUP9 197 aaKnown RBP13.11□□□□□ -0.31
PDGFB-201ENST00000331163 KIAA1324LA8MWY0 1029 aaPredicted RBP13.1□□□□□ -0.31
PDGFB-201ENST00000331163 GPR137BO60478 399 aa13.1□□□□□ -0.31
PDGFB-201ENST00000331163 OR5C1Q8NGR4 320 aa13.1□□□□□ -0.31
PDGFB-201ENST00000331163 ZNF355PQ9NSJ1 428 aa13.1□□□□□ -0.31
PDGFB-201ENST00000331163 SLC35D1Q9NTN3 355 aa13.1□□□□□ -0.31
PDGFB-201ENST00000331163 JKAMPQ9P055 326 aa13.1□□□□□ -0.31
PDGFB-201ENST00000331163 CTSZQ9UBR2 303 aa13.1□□□□□ -0.31
PDGFB-201ENST00000331163 HMGB3O15347 200 aaKnown RBP13.09□□□□□ -0.31
PDGFB-201ENST00000331163 RPL30P62888 115 aaKnown RBP13.09□□□□□ -0.31
PDGFB-201ENST00000331163 REC114Q7Z4M0 266 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 SPIN2AQ99865 258 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 SPIN2BQ9BPZ2 258 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 ZNF737O75373 536 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 CFPP27918 469 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 FAM168AQ92567 244 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 TVP23CQ96ET8 276 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 FLNAP21333 2647 aaKnown RBP13.09□□□□□ -0.31
PDGFB-201ENST00000331163 LOC105371242A0A075B767 164 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 IFNL4K9M1U5 179 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 CHST1O43916 411 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 CA11O75493 328 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 EWSR1Q01844 656 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDGFB-201ENST00000331163 FAM222BQ8WU58 562 aa13.09□□□□□ -0.31
PDGFB-201ENST00000331163 KBTBD11-OT1A0A1B0GTJ5 212 aa13.08□□□□□ -0.31
PDGFB-201ENST00000331163 DIAPH2-AS1Q14236 149 aa13.08□□□□□ -0.31
PDGFB-201ENST00000331163 LHX4Q969G2 390 aa13.08□□□□□ -0.31
PDGFB-201ENST00000331163 INSIG2Q9Y5U4 225 aa13.08□□□□□ -0.31
PDGFB-201ENST00000331163 CRYM-AS1A6NIL9 109 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 RNF212BA8MTL3 300 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 APOA2P02652 100 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 LYL1P12980 280 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 MYOD1P15172 320 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 PKIAP61925 76 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 BATFQ16520 125 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 LHFPL1Q86WI0 220 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 HIST3H2BBQ8N257 126 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 CABLES2Q9BTV7 478 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 IL15RAQ13261 267 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 ZNF788Q6ZQV5 615 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 R3HDM4Q96D70 268 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 NEIL1Q96FI4 390 aaPredicted RBP13.08□□□□□ -0.32
PDGFB-201ENST00000331163 IDI2-AS1Q9NZ38 188 aa13.08□□□□□ -0.32
PDGFB-201ENST00000331163 STRAPQ9Y3F4 350 aaKnown RBP13.08□□□□□ -0.32
PDGFB-201ENST00000331163 ADIRFQ15847 76 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 H1FOOQ8IZA3 346 aaPredicted RBP13.07□□□□□ -0.32
PDGFB-201ENST00000331163 GALNT14Q96FL9 552 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 HARBI1Q96MB7 349 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 DUX5Q96PT3 197 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 SSBP3Q9BWW4 388 aaPredicted RBP13.07□□□□□ -0.32
PDGFB-201ENST00000331163 BSNQ9UPA5 3926 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 ECI1P42126 302 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 MORN2Q502X0 79 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 BRD3OSQ6XYD6 125 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 THNSL2Q86YJ6 484 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 OR2C3Q8N628 320 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 COMMD1Q8N668 190 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 TMEM37Q8WXS4 190 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 RAB9BQ9NP90 201 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 ADH4P08319 380 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 ZNF134P52741 427 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 TAS2R60P59551 318 aa13.07□□□□□ -0.32
PDGFB-201ENST00000331163 SAA2-SAA4A0A096LPE2 208 aa13.06□□□□□ -0.32
PDGFB-201ENST00000331163 SAA2P0DJI9 122 aaPredicted RBP13.06□□□□□ -0.32
PDGFB-201ENST00000331163 TANC2Q9HCD6 1990 aa13.06□□□□□ -0.32
PDGFB-201ENST00000331163 REG1AP05451 166 aa13.06□□□□□ -0.32
PDGFB-201ENST00000331163 WNT2P09544 360 aa13.06□□□□□ -0.32
PDGFB-201ENST00000331163 DYNLT3P51808 116 aa13.06□□□□□ -0.32
PDGFB-201ENST00000331163 DAZAP2Q15038 168 aaPredicted RBP13.06□□□□□ -0.32
PDGFB-201ENST00000331163 MSMO1Q15800 293 aa13.06□□□□□ -0.32
PDGFB-201ENST00000331163 LFNGQ8NES3 379 aa13.06□□□□□ -0.32
PDGFB-201ENST00000331163 TMEM222Q9H0R3 208 aa13.06□□□□□ -0.32
PDGFB-201ENST00000331163 FOXI3A8MTJ6 420 aaPredicted RBP13.05□□□□□ -0.32
PDGFB-201ENST00000331163 SLC25A17O43808 307 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 ELLP55199 621 aaPredicted RBP13.05□□□□□ -0.32
PDGFB-201ENST00000331163 CT45A1Q5HYN5 189 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 MRPL41Q8IXM3 137 aaKnown RBP13.05□□□□□ -0.32
PDGFB-201ENST00000331163 CT45A3Q8NHU0 189 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 GPR146Q96CH1 333 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 NUDT16L1Q9BRJ7 211 aaKnown RBP13.05□□□□□ -0.32
PDGFB-201ENST00000331163 SCRT1Q9BWW7 348 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 LINC00473A8K010 186 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 SRP19P09132 144 aaKnown RBP13.05□□□□□ -0.32
PDGFB-201ENST00000331163 LY6EQ16553 131 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 ZDHHC16Q969W1 377 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 IGSF23A1L1A6 192 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 RAB29O14966 203 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 TMEM187Q14656 261 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 RTL8BQ17RB0 113 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 SSX8Q7RTT4 187 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 GINS3Q9BRX5 216 aa13.05□□□□□ -0.32
PDGFB-201ENST00000331163 MRPL20Q9BYC9 149 aaKnown RBP13.05□□□□□ -0.32
PDGFB-201ENST00000331163 CLEC18AA5D8T8 446 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 TGFAP01135 160 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms