RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 RBFOX2O43251 390 aaKnown RBP eCLIP5.17□□□□□ -1.58
CSTF3-201ENST00000323959 PSPNO60542 156 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 SCAF4O95104 1147 aaKnown RBP5.17□□□□□ -1.58
CSTF3-201ENST00000323959 APOC3P02656 99 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 NMBP08949 121 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 NFYAP23511 347 aaPredicted RBP5.17□□□□□ -1.58
CSTF3-201ENST00000323959 SAA4P35542 130 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 UBE2E1P51965 193 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 HERV-K104P61576 105 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 ANKRD55Q3KP44 614 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 PRSS54Q6PEW0 395 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 FAM219AQ8IW50 185 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 LINC00311Q8N616 119 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 ZNF645Q8N7E2 425 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 OR10V1Q8NGI7 309 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 OR2T35Q8NGX2 323 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 STOML3Q8TAV4 291 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 SCARB1Q8WTV0 552 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 RNF183Q96D59 192 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 GAFA1Q96PS6 74 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 AQP10Q96PS8 301 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 OR51M1Q9H341 326 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 RNF213Q63HN8 5207 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 TRAV38-1A0A0B4J264 116 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 NUDT19A8MXV4 375 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 FAM90A26D6RGX4 464 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 SCTP09683 121 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 P0C879 139 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 ZNF44P15621 663 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 PIGPP57054 158 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 PRAMEF6Q5VXH4 476 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 CMTM1Q8IZ96 169 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 ARL6IP6Q8N6S5 226 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 GLYATL2Q8WU03 294 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 RTN4IP1Q8WWV3 396 aaPredicted RBP5.17□□□□□ -1.58
CSTF3-201ENST00000323959 ZNF488Q96MN9 340 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 NABP2Q9BQ15 211 aa5.17□□□□□ -1.58
CSTF3-201ENST00000323959 CHMP1AQ9HD42 196 aaPredicted RBP5.17□□□□□ -1.58
CSTF3-201ENST00000323959 C3orf85A0A1B0GTC6 90 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 A6NDX4 124 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 TAAR5O14804 337 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PITX3O75364 302 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 GRPP07492 148 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PSMB6P28072 239 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 KIR2DS2P43631 304 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PRR20EP86478 221 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PRR20CP86479 221 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PRR20DP86480 221 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PRR20BP86481 221 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PRR20AP86496 221 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 RELQ04864 619 aaPredicted RBP5.16□□□□□ -1.58
CSTF3-201ENST00000323959 ACSM6Q6P461 480 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 ACOT7LQ6ZUV0 252 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 OR4D5Q8NGN0 318 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 SFT2D1Q8WV19 159 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 EDARADDQ8WWZ3 215 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 GALMQ96C23 342 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 SPIN2AQ99865 258 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 SPIN2BQ9BPZ2 258 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 TCEAL7Q9BRU2 100 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 NKX6-2Q9C056 277 aaPredicted RBP5.16□□□□□ -1.58
CSTF3-201ENST00000323959 METTL8Q9H825 291 aaKnown RBP5.16□□□□□ -1.58
CSTF3-201ENST00000323959 MSL2Q9HCI7 577 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 LINC00312Q9Y6C7 94 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 ODAMA1E959 279 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 C12orf77C9JDV5 145 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 SDCBPO00560 298 aaPredicted RBP5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PGAM2P15259 253 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 F2RP25116 425 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 RAB7AP51149 207 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 ZNF137PP52743 207 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 NMSQ5H8A3 153 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 ATRAIDQ6UW56 229 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 TMED4Q7Z7H5 227 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 ZNF429Q86V71 674 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PUSL1Q8N0Z8 303 aaKnown RBP5.16□□□□□ -1.58
CSTF3-201ENST00000323959 ZNF439Q8NDP4 499 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 OR51B6Q9H340 312 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 SIRT7Q9NRC8 400 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 LIN7CQ9NUP9 197 aaKnown RBP5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PPP1R3CQ9UQK1 317 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 TCF19Q9Y242 345 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 A0A1B0GU03 582 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 FAM74A7A6NL05 159 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 L7N2F9 121 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 SIRPB1O00241 398 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 SPINT2O43291 252 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 PGLYRP1O75594 196 aaPredicted RBP5.16□□□□□ -1.58
CSTF3-201ENST00000323959 ATG12O94817 140 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 IFNA21P01568 189 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 IRF2P14316 349 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 DUSP1P28562 367 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 S100A11P31949 105 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 TAS2R30P59541 319 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 MRGPRG-AS1Q2M3A8 158 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 FAM74A3Q4VXF1 159 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 ABCA11PQ4W5N1 156 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 KRBOX4Q5JUW0 171 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 ZNF818PQ6ZRF7 136 aa5.16□□□□□ -1.58
CSTF3-201ENST00000323959 MOGAT3Q86VF5 341 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms