RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 FCGR3BO75015 233 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 STAG3L2P0CL84 134 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 STAG3L3P0CL85 134 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 CRYBB3P26998 211 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 GCHFRP30047 84 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 CENPWQ5EE01 88 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 PRAMEF5Q5TYX0 476 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 PRAMEF6Q5VXH4 476 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 SPINK14Q6IE38 97 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 ARL6IP6Q8N6S5 226 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 AGBL5Q8NDL9 886 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 GMPPAQ96IJ6 420 aaPredicted RBP8.03□□□□□ -1.12
PTPRA-202ENST00000318266 KCNS1Q96KK3 526 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 ALKBH7Q9BT30 221 aaPredicted RBP8.03□□□□□ -1.12
PTPRA-202ENST00000318266 HINT2Q9BX68 163 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 SVILO95425 2214 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 P0C879 139 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 ESDP10768 282 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 RELBQ01201 579 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 Q0VG73 95 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 VWC2Q2TAL6 325 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 BORCS7Q96B45 105 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 SSBP3Q9BWW4 388 aaPredicted RBP8.03□□□□□ -1.12
PTPRA-202ENST00000318266 SH2D2AQ9NP31 389 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 V9GYV3 84 aa8.03□□□□□ -1.12
PTPRA-202ENST00000318266 KMT2BQ9UMN6 2715 aaPredicted RBP8.02□□□□□ -1.13
PTPRA-202ENST00000318266 CBY3A6NI87 242 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 FAM166BA8MTA8 275 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 ZNF324O75467 553 aaPredicted RBP8.02□□□□□ -1.13
PTPRA-202ENST00000318266 TSPOP30536 169 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 GNG4P50150 75 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 TRIP6Q15654 476 aaKnown RBP8.02□□□□□ -1.13
PTPRA-202ENST00000318266 OR4C5Q8NGB2 326 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 MPC1Q9Y5U8 109 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 ADAMTS20P59510 1910 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 LOC102723996A0A087X1L8 192 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 TRAV3A0A0B4J244 114 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 NKX6-3A6NJ46 265 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 OR10J4P0C629 311 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 EDDM3AQ14507 147 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 VAMP3Q15836 100 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 HES7Q9BYE0 225 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 ASPMQ8IZT6 3477 aa8.02□□□□□ -1.13
PTPRA-202ENST00000318266 BMPR1BO00238 502 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 RAB29O14966 203 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 HAND1O96004 215 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 CA2P00918 260 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 EPHA8P29322 1005 aaPredicted RBP8.01□□□□□ -1.13
PTPRA-202ENST00000318266 PSG5Q15238 335 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 EFNB3Q15768 340 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 ZNF718Q3SXZ3 478 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 NIT1Q86X76 327 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 ZNF738Q8NE65 137 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 CLEC7AQ9BXN2 247 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 MBNL3Q9NUK0 354 aaKnown RBP8.01□□□□□ -1.13
PTPRA-202ENST00000318266 AHRRA9YTQ3 701 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 CELA3BP08861 270 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 KLF3P57682 345 aaPredicted RBP8.01□□□□□ -1.13
PTPRA-202ENST00000318266 UBE2V1Q13404 147 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 TMEM136Q6ZRR5 245 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 OR4A16Q8NH70 328 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 FAM216AQ8WUB2 273 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 RAB1CQ92928 201 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 RTL8AQ9BWD3 113 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 SFXN3Q9BWM7 321 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 LOC105371242A0A075B767 164 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 TMEM30CPA0ZSE6 113 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 HELTA6NFD8 242 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 GATA2P23769 480 aaPredicted RBP8.01□□□□□ -1.13
PTPRA-202ENST00000318266 OPRK1P41145 380 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 STUMQ69YW2 141 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 MIR17HGQ75NE6 70 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 TCTEX1D1Q8N7M0 179 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 STPG3Q8N7X2 389 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 TSKUQ8WUA8 353 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 ORAOV1Q8WV07 137 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 BET1LQ9NYM9 111 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 SELENOKQ9Y6D0 94 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 COX11Q9Y6N1 276 aa8.01□□□□□ -1.13
PTPRA-202ENST00000318266 GPR179Q6PRD1 2367 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 GPR6P46095 362 aaPredicted RBP8□□□□□ -1.13
PTPRA-202ENST00000318266 PRRX1P54821 245 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 Q0VFX4 171 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 SAPCD1Q5SSQ6 148 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 ALKBH2Q6NS38 261 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 Q6ZR03 302 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 GNB1LQ9BYB4 327 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 PKIBQ9C010 78 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 SLC35D1Q9NTN3 355 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 CLCF1Q9UBD9 225 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 ZFHX4Q86UP3 3567 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 LY6G6EA0A0G2JKS1 128 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 OR7C2O60412 319 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 SLAQ13239 276 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 FBLN7Q53RD9 439 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 KLHDC1Q8N7A1 406 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 HSD17B10Q99714 261 aaKnown RBP8□□□□□ -1.13
PTPRA-202ENST00000318266 GAL3ST2Q9H3Q3 398 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 METRNQ9UJH8 293 aa8□□□□□ -1.13
PTPRA-202ENST00000318266 CDC42EP3Q9UKI2 254 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms