RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 POC5Q8NA72 575 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 OSR1Q8TAX0 266 aaPredicted RBP6.18□□□□□ -1.42
CDC42-201ENST00000315554 WIPF2Q8TF74 440 aaPredicted RBP6.18□□□□□ -1.42
CDC42-201ENST00000315554 CASTOR1Q8WTX7 329 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 CITED1Q99966 193 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 TRAV3A0A0B4J244 114 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 MFSD2BA6NFX1 497 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 MPPED1O15442 326 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 KCNAB3O43448 404 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 CNIH1O95406 144 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 CTSDP07339 412 aaPredicted RBP6.17□□□□□ -1.42
CDC42-201ENST00000315554 STAG3L3P0CL85 134 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 EGR2P11161 476 aaPredicted RBP6.17□□□□□ -1.42
CDC42-201ENST00000315554 IL7P13232 177 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 F2RP25116 425 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 S100GP29377 79 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 G6PCP35575 357 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 CCR6P51684 374 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 AP3S2P59780 193 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 SSBP2P81877 361 aaPredicted RBP6.17□□□□□ -1.42
CDC42-201ENST00000315554 ZNF45Q02386 682 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 FXYD3Q14802 87 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 PRSS8Q16651 343 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 RGS21Q2M5E4 152 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 SP6Q3SY56 376 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 ZNF585BQ52M93 769 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 PPP1R27Q86WC6 154 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 CADM3Q8N126 398 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 ADAD2Q8NCV1 583 aaKnown RBP6.17□□□□□ -1.42
CDC42-201ENST00000315554 ENKURQ8TC29 256 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 ZFAND1Q8TCF1 268 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 BORCS5Q969J3 196 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 R3HDM4Q96D70 268 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 PRRT1Q99946 306 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 RTBDNQ9BSG5 229 aaPredicted RBP6.17□□□□□ -1.42
CDC42-201ENST00000315554 ZNF430Q9H8G1 570 aaPredicted RBP6.17□□□□□ -1.42
CDC42-201ENST00000315554 PRR13Q9NZ81 148 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 COPZ2Q9P299 210 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 SCP2D1Q9UJQ7 156 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 C14orf166Q9Y224 244 aaKnown RBP6.17□□□□□ -1.42
CDC42-201ENST00000315554 VSIG4Q9Y279 399 aa6.17□□□□□ -1.42
CDC42-201ENST00000315554 TRAV41A0A0B4J266 112 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 TRAV34A0A0B4J273 112 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 LOC105371267A0A1B0GV96 52 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 TCRBV4S1A1TA0A5B7 111 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 ADARB2-AS1A8MUL3 147 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 RBFOX2O43251 390 aaKnown RBP eCLIP6.16□□□□□ -1.424e-8■■□□□ 13.9
CDC42-201ENST00000315554 KBTBD11O94819 623 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 OR2A4O95047 310 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 HPRT1P00492 218 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 HRASP01112 189 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 KRASP01116 189 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 IGKV1-39P01597 117 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 IGKV1D-39P04432 117 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 VDAC1P21796 283 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 FAUP35544 74 aaKnown RBP6.16□□□□□ -1.42
CDC42-201ENST00000315554 RND3P61587 244 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 OR4A47Q6IF82 309 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 UNQ5815/PRO19632Q6UWF5 114 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 C18orf65Q6ZTR6 163 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 TMED4Q7Z7H5 227 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 PUSL1Q8N0Z8 303 aaKnown RBP6.16□□□□□ -1.42
CDC42-201ENST00000315554 TEX45Q8NA69 505 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 LFNGQ8NES3 379 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 DMBX1Q8NFW5 382 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 OR4X2Q8NGF9 303 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 CHPT1Q8WUD6 406 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 ARPC1AQ92747 370 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 ZNF486Q96H40 463 aaPredicted RBP6.16□□□□□ -1.42
CDC42-201ENST00000315554 TMEM68Q96MH6 324 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 OR2A7Q96R45 310 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 TP53RKQ96S44 253 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 GPR61Q9BZJ8 451 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 C5orf66Q9H5L9 145 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 TMEM140Q9NV12 185 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 GPR132Q9UNW8 380 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 NSG2Q9Y328 171 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 PLXNB1O43157 2135 aa6.16□□□□□ -1.42
CDC42-201ENST00000315554 TEX13DA0A0J9YY54 714 aaPredicted RBP6.15□□□□□ -1.42
CDC42-201ENST00000315554 C3orf85A0A1B0GTC6 90 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 A0A1W2PN81 502 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 MARCH11A6NNE9 402 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 SOX15O60248 233 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 TNFRSF6BO95407 300 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 TSPAN15O95858 294 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 IGF1P05019 195 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 NQO2P16083 231 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 AKR1C4P17516 323 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 CD33P20138 364 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 CD40LGP29965 261 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 CHRNA7P36544 502 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 NUP62P37198 522 aaPredicted RBP6.15□□□□□ -1.42
CDC42-201ENST00000315554 TAS2R31P59538 309 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 ERVK-16P61578 105 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 SLC35B1P78383 322 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 DEFA5Q01523 94 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 CFHR3Q02985 330 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 IZUMO4Q1ZYL8 232 aa6.15□□□□□ -1.42
CDC42-201ENST00000315554 ZNF562Q6V9R5 426 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms