RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ASCL3Q9NQ33 180 aa11.13□□□□□ -0.63
SKA3-202ENST00000314759 TRAV3A0A0B4J244 114 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 FCN1O00602 326 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 GFRA3O60609 400 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 OR4A16Q8NH70 328 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 ZPBPQ9BS86 351 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 FAM234AQ9H0X4 552 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 CHODLQ9H9P2 273 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 SEPSECSQ9HD40 501 aaKnown RBP11.12□□□□□ -0.63
SKA3-202ENST00000314759 IL36BQ9NZH7 164 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 KNTC1P50748 2209 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 SPINK4O60575 86 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 GPR12P47775 334 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 RPP30P78346 268 aaKnown RBP11.12□□□□□ -0.63
SKA3-202ENST00000314759 SPRR3Q9UBC9 169 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 ZNF891A8MT65 544 aaPredicted RBP11.12□□□□□ -0.63
SKA3-202ENST00000314759 DIRC3C9JPN6 131 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 CCL25O15444 150 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 TNFSF15O95150 251 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 CTRLP40313 264 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 SPATA31B1PQ5VZV4 182 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 GNB4Q9HAV0 340 aa11.12□□□□□ -0.63
SKA3-202ENST00000314759 LSM4Q9Y4Z0 139 aaKnown RBP11.12□□□□□ -0.63
SKA3-202ENST00000314759 SPINT2O43291 252 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 GPX1P07203 203 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 GCHFRP30047 84 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 HTD2P86397 168 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 TGFBR3Q03167 851 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 KIAA1644Q3SXP7 199 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 SPATA45Q537H7 98 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 RNFT1Q5M7Z0 435 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 SIGLECL1Q8N7X8 197 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 TET2Q6N021 2002 aaPredicted RBP11.11□□□□□ -0.63
SKA3-202ENST00000314759 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.11□□□□□ -0.63
SKA3-202ENST00000314759 A0A1W2PNU3 283 aaPredicted RBP11.11□□□□□ -0.63
SKA3-202ENST00000314759 FAM90A9PA6NNJ1 464 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 SNURFLB1AK76 121 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 KLRC4-KLRK1H3BQV0 150 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 FOXH1O75593 365 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 RELBQ01201 579 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 EDDM3AQ14507 147 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 EFNB3Q15768 340 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 CD177Q8N6Q3 437 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 OR52E5Q8NH55 327 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 CXXC4Q9H2H0 198 aa11.11□□□□□ -0.63
SKA3-202ENST00000314759 KLF13Q9Y2Y9 288 aaPredicted RBP11.11□□□□□ -0.63
SKA3-202ENST00000314759 TBL2Q9Y4P3 447 aaKnown RBP11.11□□□□□ -0.63
SKA3-202ENST00000314759 TRAV34A0A0B4J273 112 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 IGHV3-13P01766 116 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 IGHV3-7P01780 117 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 ADH4P08319 380 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 LGALS4P56470 323 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 RPL39P5Q59GN2 51 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 MDS2Q8NDY4 140 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 RCHY1Q96PM5 261 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 FZR1Q9UM11 496 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 TRAV9-1A0A075B6T8 112 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 M0R1X1 148 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 GCNT2Q8N0V5 402 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 ST6GALNAC3Q8NDV1 305 aa11.1□□□□□ -0.63
SKA3-202ENST00000314759 TRIOBPQ9H2D6 2365 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 OR5G3P0C626 314 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 MORN2Q502X0 79 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 C1orf174Q8IYL3 243 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 GMPPAQ96IJ6 420 aaPredicted RBP11.09□□□□□ -0.63
SKA3-202ENST00000314759 NPVFQ9HCQ7 196 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 NRN1Q9NPD7 142 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 GNG12Q9UBI6 72 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 TRGV5A0A0B4J1U4 118 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 HYPMO75409 117 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 AGFG2O95081 481 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 ZNF134P52741 427 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 RBX1P62877 108 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 SUMO1P63165 101 aaKnown RBP11.09□□□□□ -0.63
SKA3-202ENST00000314759 SLC35B1P78383 322 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 Q0VG73 95 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 SMIM21Q3B7S5 101 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 FAM90A1Q86YD7 464 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 STPG3Q8N7X2 389 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 EAF1Q96JC9 268 aaPredicted RBP11.09□□□□□ -0.63
SKA3-202ENST00000314759 CDX2Q99626 313 aaPredicted RBP11.09□□□□□ -0.63
SKA3-202ENST00000314759 WNT10AQ9GZT5 417 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 TMEM140Q9NV12 185 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 SLC45A2Q9UMX9 530 aa11.09□□□□□ -0.63
SKA3-202ENST00000314759 PMCHP20382 165 aa11.08□□□□□ -0.63
SKA3-202ENST00000314759 LPAL2Q16609 132 aa11.08□□□□□ -0.63
SKA3-202ENST00000314759 MAJINQ3KP22 176 aa11.08□□□□□ -0.63
SKA3-202ENST00000314759 Q6ZN92 141 aa11.08□□□□□ -0.63
SKA3-202ENST00000314759 MMD2Q8IY49 270 aa11.08□□□□□ -0.63
SKA3-202ENST00000314759 OR8I2Q8N0Y5 310 aa11.08□□□□□ -0.63
SKA3-202ENST00000314759 OR4B1Q8NGF8 309 aa11.08□□□□□ -0.63
SKA3-202ENST00000314759 RNF2Q99496 336 aa11.08□□□□□ -0.63
SKA3-202ENST00000314759 TCF19Q9Y242 345 aa11.08□□□□□ -0.63
SKA3-202ENST00000314759 ZDBF2Q9HCK1 2354 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 TNRC18O15417 2968 aaPredicted RBP11.08□□□□□ -0.64
SKA3-202ENST00000314759 TRGV10A0A0A0MS01 117 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 LNP1A1A4G5 178 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 C20orf202A1L168 122 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 C9JCJ5 164 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms