RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 LYPD6BQ8NI32 183 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 C10orf105Q8TEF2 133 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 RNF5Q99942 180 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 HINT2Q9BX68 163 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 COMMD5Q9GZQ3 224 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 PLEKHA3Q9HB20 300 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 UQCC1Q9NVA1 299 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 RRHO14718 337 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 VWC2Q2TAL6 325 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 TOR2AQ5JU69 321 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 CLEC2AQ6UVW9 174 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 ETV3LQ6ZN32 361 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 TEX45Q8NA69 505 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 RITA1Q96K30 269 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 PSMG3Q9BT73 122 aaPredicted RBP13.5□□□□□ -0.25
CLCF1-201ENST00000312438 SIRPDQ9H106 197 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 RFNGQ9Y644 331 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 EPG5Q9HCE0 2579 aa13.49□□□□□ -0.25
CLCF1-201ENST00000312438 A1L4Q6 167 aa13.49□□□□□ -0.25
CLCF1-201ENST00000312438 MYOD1P15172 320 aa13.49□□□□□ -0.25
CLCF1-201ENST00000312438 ATP5IP56385 69 aaPredicted RBP13.49□□□□□ -0.25
CLCF1-201ENST00000312438 PJVKQ0ZLH3 352 aa13.49□□□□□ -0.25
CLCF1-201ENST00000312438 AKR1C8PQ5T2L2 129 aa13.49□□□□□ -0.25
CLCF1-201ENST00000312438 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
CLCF1-201ENST00000312438 SLC24A4Q8NFF2 622 aa13.49□□□□□ -0.25
CLCF1-201ENST00000312438 OR1L8Q8NGR8 309 aa13.49□□□□□ -0.25
CLCF1-201ENST00000312438 TAF15Q92804 592 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLCF1-201ENST00000312438 GGACTQ9BVM4 153 aa13.49□□□□□ -0.25
CLCF1-201ENST00000312438 POLR3KQ9Y2Y1 108 aaPredicted RBP13.49□□□□□ -0.25
CLCF1-201ENST00000312438 A0A1W2PPI3 338 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 VWC2LB2RUY7 222 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 OPN1MWP04001 364 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 OPN1MW2P0DN77 364 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 OPN1MW3P0DN78 364 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 SERF2P84101 59 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 KLRD1Q13241 179 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 LDLRAD2Q5SZI1 272 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 NDUFA4L2Q9NRX3 87 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 DOCK11Q5JSL3 2073 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 UBE2L5PA0A1B0GUS4 154 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 KRBOX1C9JBD0 128 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 SLC25A17O43808 307 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 TOX4O94842 621 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 IFNA4P05014 189 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 PAX1P15863 534 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 NPY1RP25929 384 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 CD1BP29016 333 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 FHITP49789 147 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 ZNF616Q08AN1 781 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 DPPA3Q6W0C5 159 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 RSG1Q9BU20 258 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 FBXO7Q9Y3I1 522 aa13.48□□□□□ -0.25
CLCF1-201ENST00000312438 SPTAN1Q13813 2472 aaKnown RBP13.47□□□□□ -0.25
CLCF1-201ENST00000312438 INS-IGF2F8WCM5 200 aa13.47□□□□□ -0.25
CLCF1-201ENST00000312438 RNASEK-C17orf49H0YIS7 233 aa13.47□□□□□ -0.25
CLCF1-201ENST00000312438 MINOS1Q5TGZ0 78 aa13.47□□□□□ -0.25
CLCF1-201ENST00000312438 CENPVQ7Z7K6 275 aaPredicted RBP13.47□□□□□ -0.25
CLCF1-201ENST00000312438 FAM213BQ8TBF2 198 aa13.47□□□□□ -0.25
CLCF1-201ENST00000312438 TMEM170AQ8WVE7 144 aa13.47□□□□□ -0.25
CLCF1-201ENST00000312438 ZNF430Q9H8G1 570 aaPredicted RBP13.47□□□□□ -0.25
CLCF1-201ENST00000312438 TIMM9Q9Y5J7 89 aa13.47□□□□□ -0.25
CLCF1-201ENST00000312438 MINOS1-NBL1R4GNA1 71 aa13.47□□□□□ -0.25
CLCF1-201ENST00000312438 USP9XQ93008 2570 aaPredicted RBP13.47□□□□□ -0.25
CLCF1-201ENST00000312438 A0A1W2PN81 502 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 OOSP1A8MZH6 123 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 TSPAN15O95858 294 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 CA2P00918 260 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 CRYGBP07316 175 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 HOXB4P17483 251 aaPredicted RBP13.46□□□□□ -0.25
CLCF1-201ENST00000312438 MDKP21741 143 aaPredicted RBP13.46□□□□□ -0.25
CLCF1-201ENST00000312438 CHRNA7P36544 502 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 DVL1P1P54792 670 aaPredicted RBP13.46□□□□□ -0.25
CLCF1-201ENST00000312438 LGALS4P56470 323 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 DSCR9P59020 149 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 PSG5Q15238 335 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 LHFPL4Q7Z7J7 247 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 HILPDAQ9Y5L2 63 aa13.46□□□□□ -0.25
CLCF1-201ENST00000312438 PRSS46E5RG02 174 aa13.46□□□□□ -0.26
CLCF1-201ENST00000312438 TIMM23O14925 209 aa13.46□□□□□ -0.26
CLCF1-201ENST00000312438 DLK1P80370 383 aa13.46□□□□□ -0.26
CLCF1-201ENST00000312438 ERHP84090 104 aaKnown RBP13.46□□□□□ -0.26
CLCF1-201ENST00000312438 HABP2Q14520 560 aaPredicted RBP13.46□□□□□ -0.26
CLCF1-201ENST00000312438 CCDC144NLQ6NUI1 221 aa13.46□□□□□ -0.26
CLCF1-201ENST00000312438 COMMD1Q8N668 190 aa13.46□□□□□ -0.26
CLCF1-201ENST00000312438 IGHV4-61A0A0C4DH41 118 aa13.45□□□□□ -0.26
CLCF1-201ENST00000312438 FAM157AC9JC47 383 aa13.45□□□□□ -0.26
CLCF1-201ENST00000312438 FGF7P21781 194 aa13.45□□□□□ -0.26
CLCF1-201ENST00000312438 SNCAP37840 140 aa13.45□□□□□ -0.26
CLCF1-201ENST00000312438 UBE2E1P51965 193 aa13.45□□□□□ -0.26
CLCF1-201ENST00000312438 MMD2Q8IY49 270 aa13.45□□□□□ -0.26
CLCF1-201ENST00000312438 PERPQ96FX8 193 aa13.45□□□□□ -0.26
CLCF1-201ENST00000312438 SIGLEC9Q9Y336 463 aa13.45□□□□□ -0.26
CLCF1-201ENST00000312438 A0A1W2PRD5 423 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 A0A1W2PRF3 423 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 A0A1W2PRM7 423 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 VENTXO95231 258 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 ZP3P21754 424 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 MAS1LP35410 378 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 PRSS8Q16651 343 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 MRGPRG-AS1Q2M3A8 158 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms