RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 FAM212BQ9NTI7 297 aaPredicted RBP7.11□□□□□ -1.27
PDE4D-201ENST00000309641 CENPXA8MT69 81 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 TEX22C9J3V5 150 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 RBMXL2O75526 392 aaKnown RBP7.1□□□□□ -1.27
PDE4D-201ENST00000309641 IGHG4P01861 327 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 RPLP1P05386 114 aaKnown RBP7.1□□□□□ -1.27
PDE4D-201ENST00000309641 HLA-GP17693 338 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 VDAC1P21796 283 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 VAMP1P23763 118 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 ERVK-16P61578 105 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 DEFA5Q01523 94 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 DHODHQ02127 395 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 ASAH1Q13510 395 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 NSUN5P1Q3KNT7 163 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 TMEM128Q5BJH2 165 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 Q6ZRM9 215 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 SELENOHQ8IZQ5 122 aaKnown RBP7.1□□□□□ -1.27
PDE4D-201ENST00000309641 GALNT14Q96FL9 552 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 TRAV6A0A075B6T7 132 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 A0A0B4J293 547 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 ACTL6BO94805 426 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 IGLV1-40P01703 118 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 PRH1P02810 166 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 TCRBP04435 133 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 AREGP15514 252 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 PSMB8P28062 276 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 AKR1C2P52895 323 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 ANKRD55Q3KP44 614 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 AKIRIN2Q53H80 203 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 KHDC1LQ5JSQ8 128 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 TMEM268Q5VZI3 342 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 H2BFWTQ7Z2G1 175 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 SLC25A42Q86VD7 318 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 OR10W1Q8NGF6 305 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 RBPMSQ93062 196 aaKnown RBP7.1□□□□□ -1.27
PDE4D-201ENST00000309641 MS4A10Q96PG2 267 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 FYTTD1Q96QD9 318 aaKnown RBP7.1□□□□□ -1.27
PDE4D-201ENST00000309641 C20orf85Q9H1P6 137 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 NUDT15Q9NV35 164 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 ZNF580Q9UK33 172 aa7.1□□□□□ -1.27
PDE4D-201ENST00000309641 TEX50A0A1B0GTY4 177 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 TCRBV4S1A1TA0A5B7 111 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 REG1AP05451 166 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 PF4V1P10720 104 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 RPL27AP46776 148 aaKnown RBP7.09□□□□□ -1.27
PDE4D-201ENST00000309641 RAB25P57735 213 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 SLC35B1P78383 322 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 KIAA0141Q14154 515 aaPredicted RBP7.09□□□□□ -1.27
PDE4D-201ENST00000309641 TEX38Q6PEX7 206 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 LYZL2Q7Z4W2 148 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 SLC35G3Q8N808 338 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 OR4X2Q8NGF9 303 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 OR52B4Q8NGK2 314 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 OR4A5Q8NH83 315 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 TMEM56Q96MV1 263 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 PHB2Q99623 299 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 AIFM2Q9BRQ8 373 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 TMEM14BQ9NUH8 114 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 FOXA2Q9Y261 457 aaPredicted RBP7.09□□□□□ -1.27
PDE4D-201ENST00000309641 KCNIP3Q9Y2W7 256 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 TMEM56-RWDD3S4R434 201 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 MGAM2Q2M2H8 2515 aa7.09□□□□□ -1.27
PDE4D-201ENST00000309641 TSPAN15O95858 294 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 TMEM267Q0VDI3 215 aaPredicted RBP7.08□□□□□ -1.28
PDE4D-201ENST00000309641 SPINK9Q5DT21 86 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 NRARPQ7Z6K4 114 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 ZNF695Q8IW36 515 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 RNF152Q8N8N0 203 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 QTRT1Q9BXR0 403 aaKnown RBP7.08□□□□□ -1.28
PDE4D-201ENST00000309641 FAM240BA0A1B0GVZ2 78 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 IGLC7A0M8Q6 106 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 C9orf170A2RU37 121 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 C15orf61A6NNL5 157 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 CREBL2O60519 120 aaPredicted RBP7.08□□□□□ -1.28
PDE4D-201ENST00000309641 B3GALNT1O75752 331 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 SNAPC5O75971 98 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 SFT2D2O95562 160 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 OR4E1P0C645 316 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 MAS1LP35410 378 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 RAB9AP51151 201 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 UBE2MP61081 183 aaKnown RBP7.08□□□□□ -1.28
PDE4D-201ENST00000309641 DHRS2Q13268 280 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 FOXE3Q13461 319 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 CADM3Q8N126 398 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 GPR146Q96CH1 333 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 DUX3Q96PT4 197 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 OR5B12Q96R08 314 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 SPIN2AQ99865 258 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 SPIN2BQ9BPZ2 258 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 HINT2Q9BX68 163 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 GON7Q9BXV9 100 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 COMMD5Q9GZQ3 224 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 GNB4Q9HAV0 340 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 OR51B2Q9Y5P1 312 aa7.08□□□□□ -1.28
PDE4D-201ENST00000309641 NOTCH3Q9UM47 2321 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 NXPH3O95157 252 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 HLA-AP01891 365 aaKnown RBP7.07□□□□□ -1.28
PDE4D-201ENST00000309641 ELANEP08246 267 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 SPNP16150 400 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 WT1-ASQ06250 92 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 1559.8 ms