RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 REG1AP05451 166 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 CRISP2P16562 243 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 PMS2P11Q13670 270 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 TBR1Q16650 682 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 PCSK4Q6UW60 755 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 EIF4E3Q8N5X7 224 aaKnown RBP9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 ZNF525Q8N782 197 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 P01737 135 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 NTF4P34130 210 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 BMI1P35226 326 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 MEOX2P50222 304 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 DTX1Q86Y01 620 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 C8orf88P0DMB2 117 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 ZNF506Q5JVG8 444 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 C5orf24Q7Z6I8 188 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 STPG3Q8N7X2 389 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 NPIPB3Q92617 1050 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 NABP2Q9BQ15 211 aa9.55□□□□□ -0.88
PCDHGC3-201ENST00000308177 ELOA3CA0A087WX78 387 aaPredicted RBP9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 IGHV3-48P01763 117 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 RSPO1Q2MKA7 263 aaPredicted RBP9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 MRPL54Q6P161 138 aaKnown RBP9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 MS4A10Q96PG2 267 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 CARHSP1Q9Y2V2 147 aaKnown RBP9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 SAA2-SAA4A0A096LPE2 208 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 SAA2P0DJI9 122 aaPredicted RBP9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 RNF138Q8WVD3 245 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 GGACTQ9BVM4 153 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 GTF3C1Q12789 2109 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 LOC102723971A0A1B0GUV8 181 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 HLA-DRB5Q30154 266 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 DNM1P46Q6ZS02 220 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 MRPL20Q9BYC9 149 aaKnown RBP9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 COL4A3Q01955 1670 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 IGKV3-15P01624 115 aa9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 MDKP21741 143 aaPredicted RBP9.54□□□□□ -0.88
PCDHGC3-201ENST00000308177 DUTP33316 252 aaKnown RBP9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 IQCJQ1A5X6 159 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 TRBV6-6A0A0A6YYG2 114 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 TMEM250H0YL14 139 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 FGF16O43320 207 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 ZNF253O75346 499 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 HIST1H1EP10412 219 aaKnown RBP9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 SELLP14151 372 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 HIST1H1BP16401 226 aaKnown RBP9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 TFF3Q07654 80 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 Q6P435 159 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 RNASEKQ6P5S7 137 aaKnown RBP9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 FA2HQ7L5A8 372 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 NEU4Q8WWR8 484 aaPredicted RBP9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 PARLQ9H300 379 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 RBFOX2O43251 390 aaKnown RBP eCLIP9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 ACAA1P09110 424 aaPredicted RBP9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 IER3P46695 156 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 ZNF788Q6ZQV5 615 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 OR4A5Q8NH83 315 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 GATAD1Q8WUU5 269 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 C19orf24Q9BVV8 132 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 IFT22Q9H7X7 185 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 MLNRO43193 412 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 DKK1O94907 266 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 TDGF1P13385 188 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 ZNF474Q6S9Z5 364 aaPredicted RBP9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 SRD5A3Q9H8P0 318 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 DPM3Q9P2X0 92 aa9.53□□□□□ -0.88
PCDHGC3-201ENST00000308177 SNURFLB1AK76 121 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 TOMM20LQ6UXN7 152 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 RBM14Q96PK6 669 aaKnown RBP9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 ZGRF1Q86YA3 2104 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 IL6RP08887 468 aaPredicted RBP9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 PPOXP50336 477 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 FAM3BP58499 235 aaPredicted RBP9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 Q6ZS49 121 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 HS3ST6Q96QI5 342 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 PITPNC1Q9UKF7 332 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 CXorf65A6NEN9 183 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 AMTP48728 403 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 ATP5J2P56134 94 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 ATRAIDQ6UW56 229 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 OR51G1Q8NGK1 321 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 OR5R1Q8NH85 324 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 IFI27L2Q9H2X8 130 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 METRNQ9UJH8 293 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 SHANK1Q9Y566 2161 aa9.52□□□□□ -0.89
PCDHGC3-201ENST00000308177 PGPA6NDG6 321 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 TRGC2P03986 189 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 UNQ5815/PRO19632Q6UWF5 114 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 CD177Q8N6Q3 437 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 WFDC1Q9HC57 220 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 UTRNP46939 3433 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 A0A0G2JNJ9 132 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 GCHFRP30047 84 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 SRSF4Q08170 494 aaKnown RBP9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 FXYD3Q14802 87 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 BPIFA4PQ86YQ2 179 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 CYTL1Q9NRR1 136 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 Q9UFV3 132 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 CREBBPQ92793 2442 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 SRP19P09132 144 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms