RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 IGHV4-30-2A0A087WSY4 118 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 ZNF705EA8MWA4 302 aaPredicted RBP12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 FAM157AC9JC47 383 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 RNASEK-C17orf49H0YIS7 233 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 OR8U8P0C7N1 319 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 KRTAP10-9P60411 292 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 ARL16Q0P5N6 197 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 MINOS1Q5TGZ0 78 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 SAT2Q96F10 170 aaPredicted RBP12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 HINT2Q9BX68 163 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 REG4Q9BYZ8 158 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 MINOS1-NBL1R4GNA1 71 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 LRRK2Q5S007 2527 aa12.67□□□□□ -0.38
HERPUD1-201ENST00000300302 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
HERPUD1-201ENST00000300302 ATP6V0CP27449 155 aa12.67□□□□□ -0.38
HERPUD1-201ENST00000300302 RAB5CP51148 216 aa12.67□□□□□ -0.38
HERPUD1-201ENST00000300302 RAB11AP62491 216 aa12.67□□□□□ -0.38
HERPUD1-201ENST00000300302 TEX45Q8NA69 505 aa12.67□□□□□ -0.38
HERPUD1-201ENST00000300302 PARD6GQ9BYG4 376 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-201ENST00000300302 SH3BGRL3Q9H299 93 aa12.67□□□□□ -0.38
HERPUD1-201ENST00000300302 HILPDAQ9Y5L2 63 aa12.67□□□□□ -0.38
HERPUD1-201ENST00000300302 TENM4Q6N022 2769 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 TEX50A0A1B0GTY4 177 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 C15orf62A8K5M9 175 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 PMS2P5A8MQ11 134 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 TIMM23O14925 209 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 SLC25A17O43808 307 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 SLC25A16P16260 332 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 CD1BP29016 333 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 UBE2E1P51965 193 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 LDLRAD2Q5SZI1 272 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 OR1L8Q8NGR8 309 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 LPAR2Q9HBW0 351 aa12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 TBL2Q9Y4P3 447 aaKnown RBP12.66□□□□□ -0.38
HERPUD1-201ENST00000300302 A0A1W2PRD5 423 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 A0A1W2PRF3 423 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 A0A1W2PRM7 423 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 F2RL1P55085 397 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 BLOC1S1P78537 153 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 AANATQ16613 207 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 CLEC12BQ2HXU8 276 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 LHFPL4Q7Z7J7 247 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 SLC24A4Q8NFF2 622 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 OR2G3Q8NGZ4 309 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 TBX15Q96SF7 602 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 TMEM147Q9BVK8 224 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 MFSD2BA6NFX1 497 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 UMAD1C9J7I0 102 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 OPN1MWP04001 364 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 OPN1MW2P0DN77 364 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 OPN1MW3P0DN78 364 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 MYOD1P15172 320 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 ATP5IP56385 69 aaPredicted RBP12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 HABP2Q14520 560 aaPredicted RBP12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 LRRC75BQ2VPJ9 315 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 RITA1Q96K30 269 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 ZNF430Q9H8G1 570 aaPredicted RBP12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 UQCC1Q9NVA1 299 aa12.65□□□□□ -0.38
HERPUD1-201ENST00000300302 TET2Q6N021 2002 aaPredicted RBP12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 A0A1W2PN81 502 aa12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 NPY1RP25929 384 aa12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 CHRNA7P36544 502 aa12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 PSG5Q15238 335 aa12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 SSX2Q16385 188 aa12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 TOR2AQ5JU69 321 aa12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 ETV3LQ6ZN32 361 aa12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 THNSL2Q86YJ6 484 aa12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 MMD2Q8IY49 270 aa12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 WDR61Q9GZS3 305 aaKnown RBP12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 NDUFA4L2Q9NRX3 87 aa12.64□□□□□ -0.39
HERPUD1-201ENST00000300302 UBE2L5PA0A1B0GUS4 154 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 TRIM77I1YAP6 450 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 RRHO14718 337 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 ACTL6BO94805 426 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 VENTXO95231 258 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 PRH1P02810 166 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 IFNA4P05014 189 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 RUNX1Q01196 453 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 PAX8Q06710 450 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 TMEM182Q6ZP80 229 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 CFHR4Q92496 578 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 GGACTQ9BVM4 153 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 PARP11Q9NR21 331 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 BEX4Q9NWD9 120 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 MAS1LP35410 378 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 ERHP84090 104 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 VWC2Q2TAL6 325 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 MRPL41Q8IXM3 137 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 MALSU1Q96EH3 234 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 PSMG3Q9BT73 122 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 PLA2G2EQ9NZK7 142 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 SIGLEC9Q9Y336 463 aa12.63□□□□□ -0.39
HERPUD1-201ENST00000300302 FBN2P35556 2912 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 TACC2O95359 2948 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 NUDT19A8MXV4 375 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 INS-IGF2F8WCM5 200 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 MOSP00540 346 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 CRYGBP07316 175 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 SNCAP37840 140 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 CAMLGP49069 296 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms