RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 C1QTNF9P0C862 333 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 ARPC1AQ92747 370 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 PLAC1Q9HBJ0 212 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 CACNA1DQ01668 2161 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 ARID2Q68CP9 1835 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 DPRXA6NFQ7 191 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 GDF9O60383 454 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 IFI6P09912 130 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 RASL11AQ6T310 242 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 SSBP3Q9BWW4 388 aaPredicted RBP4.77□□□□□ -1.65
CPSF2-201ENST00000298875 SPTBN2O15020 2390 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 TRAV1-1A0A0B4J248 108 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 LINC00587B1AMM8 73 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM258P61165 79 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF818PQ6ZRF7 136 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 DNASE2BQ8WZ79 361 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 SPSB4Q96A44 273 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 TRAV8-4A0A0B4J246 113 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 PGPA6NDG6 321 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 UCP3P55916 312 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 FAM159AQ6UWV7 190 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 EP300Q09472 2414 aaPredicted RBP4.77□□□□□ -1.65
CPSF2-201ENST00000298875 FOXI3A8MTJ6 420 aaPredicted RBP4.77□□□□□ -1.65
CPSF2-201ENST00000298875 C16orf97H3BN30 126 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 MOSPD3O75425 235 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 LY6EQ16553 131 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF660Q6AZW8 331 aaPredicted RBP4.77□□□□□ -1.65
CPSF2-201ENST00000298875 PARP14Q460N5 1801 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 CCL4P13236 92 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 PLNP26678 52 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 UCP2P55851 309 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 SNRPD3P62318 126 aaKnown RBP4.77□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF385AQ96PM9 386 aaKnown RBP4.77□□□□□ -1.65
CPSF2-201ENST00000298875 GPR6P46095 362 aaPredicted RBP4.77□□□□□ -1.65
CPSF2-201ENST00000298875 OR10W1Q8NGF6 305 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 AICDAQ9GZX7 198 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 WDR54Q9H977 334 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 PGPEP1LA6NFU8 196 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 ZG16O60844 167 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 HOXA5P20719 270 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 CRYBB3P26998 211 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 H2BFSP57053 126 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 C10orf111Q8N326 155 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 STPG3Q8N7X2 389 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 AQP3Q92482 292 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 CHCHD1Q96BP2 118 aaKnown RBP4.77□□□□□ -1.65
CPSF2-201ENST00000298875 PSMB11A5LHX3 300 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 FGF12P61328 243 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 MAJINQ3KP22 176 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 C10orf128Q5T292 105 aa4.77□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF324BQ6AW86 544 aaPredicted RBP4.77□□□□□ -1.65
CPSF2-201ENST00000298875 TAF15Q92804 592 aaKnown RBP eCLIP4.77□□□□□ -1.65
CPSF2-201ENST00000298875 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.76□□□□□ -1.65
CPSF2-201ENST00000298875 CCL21O00585 134 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 MC5RP33032 325 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 CTAG1AP78358 180 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 ATXN8Q156A1 80 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 MMD2Q8IY49 270 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 A0A0G2JMM0 328 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 A0A1W2PPB8 328 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 KIR3DP1A8MWS1 328 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 NDUFC2O95298 119 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 KIR2DL4Q99706 377 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 SPAG8Q99932 426 aaPredicted RBP4.76□□□□□ -1.65
CPSF2-201ENST00000298875 G6PC2Q9NQR9 355 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 NRXN2Q9P2S2 1712 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 TRAV8-6A0A0B4J262 113 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 GPR183P32249 361 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM170BQ5T4T1 132 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 ST6GALNAC3Q8NDV1 305 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 SVILO95425 2214 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 IGKV3-20P01619 116 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 PPBPP02775 128 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 CBLN1P23435 193 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 RND3P61587 244 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 GOLT1AQ6ZVE7 132 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 SNAI2O43623 268 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 UPK3AO75631 287 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 RND2P52198 227 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 PSG4Q00888 419 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 UNQ5815/PRO19632Q6UWF5 114 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 SPRED2Q7Z698 418 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM52Q8NDY8 209 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 SNRNP200O75643 2136 aaKnown RBP4.76□□□□□ -1.65
CPSF2-201ENST00000298875 J3KT08 172 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 C1QCP02747 245 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 CENPWQ5EE01 88 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 CCL19Q99731 98 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 TLNRD1Q9H1K6 362 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 TRAV30A0A087WSZ9 112 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 CDK2AP2O75956 126 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 CXorf66Q5JRM2 361 aaPredicted RBP4.76□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF826PQ6ZT77 177 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 DRAM1Q8N682 238 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 IDI2-AS1Q9NZ38 188 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 NOTCH3Q9UM47 2321 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 MCM3APO60318 1980 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 IGHV3-23P01764 117 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 SDHCQ99643 169 aaPredicted RBP4.76□□□□□ -1.65
CPSF2-201ENST00000298875 WNT10AQ9GZT5 417 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms