RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 RCHY1Q96PM5 261 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 ALKBH7Q9BT30 221 aaPredicted RBP9.53□□□□□ -0.88
TRUB1-201ENST00000298746 PKIBQ9C010 78 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 WDR54Q9H977 334 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 SH2D2AQ9NP31 389 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 TRBV6-6A0A0A6YYG2 114 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 OOEPA6NGQ2 149 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 LINC00473A8K010 186 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 ALKBH6Q3KRA9 238 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 ZNF596Q8TC21 504 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 PCED1AQ9H1Q7 454 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 ZNF703Q9H7S9 590 aaPredicted RBP9.52□□□□□ -0.89
TRUB1-201ENST00000298746 ARFGEF3Q5TH69 2177 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 PINLYPA6NC86 204 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 CCL25O15444 150 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 ZNF324O75467 553 aaPredicted RBP9.52□□□□□ -0.89
TRUB1-201ENST00000298746 STAG3L2P0CL84 134 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 STAG3L3P0CL85 134 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 EPHA8P29322 1005 aaPredicted RBP9.52□□□□□ -0.89
TRUB1-201ENST00000298746 MFAP2P55001 183 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 TEPPQ6URK8 271 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 STPG3Q8N7X2 389 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 KCNS1Q96KK3 526 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 S1PR3Q99500 378 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 TXNDC17Q9BRA2 123 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 HES7Q9BYE0 225 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 SLC45A2Q9UMX9 530 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 RNF114Q9Y508 228 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.52□□□□□ -0.89
TRUB1-201ENST00000298746 K7EN84 100 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 MPDU1O75352 247 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 IGLC2P0DOY2 106 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 IGLC3P0DOY3 106 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 LGALS4P56470 323 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 ARG2P78540 354 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 RELBQ01201 579 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 IBA57Q5T440 356 aaKnown RBP9.52□□□□□ -0.89
TRUB1-201ENST00000298746 LYSMD4Q5XG99 296 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 GGTLC1Q9BX51 225 aa9.52□□□□□ -0.89
TRUB1-201ENST00000298746 KLF7O75840 302 aaPredicted RBP9.51□□□□□ -0.89
TRUB1-201ENST00000298746 MT-ND6P03923 174 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 MAGEA5P43359 124 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 FABP6P51161 128 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 GFRA1P56159 465 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 SELENOTP62341 195 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 OR1C1Q15619 314 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 MRPL52Q86TS9 123 aaKnown RBP9.51□□□□□ -0.89
TRUB1-201ENST00000298746 MGST2Q99735 147 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 PHF7Q9BWX1 381 aaPredicted RBP9.51□□□□□ -0.89
TRUB1-201ENST00000298746 WASHC3Q9Y3C0 194 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 GPR179Q6PRD1 2367 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 GVINP1Q7Z2Y8 2422 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 A0A1W2PS18 150 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 GATA2P23769 480 aaPredicted RBP9.51□□□□□ -0.89
TRUB1-201ENST00000298746 OPRK1P41145 380 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 IL11RAQ14626 422 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 IL19Q9UHD0 177 aa9.51□□□□□ -0.89
TRUB1-201ENST00000298746 PMS2P5A8MQ11 134 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 TDGF1P13385 188 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 CXCL12P48061 93 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 ZNF83P51522 516 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 KLF3P57682 345 aaPredicted RBP9.5□□□□□ -0.89
TRUB1-201ENST00000298746 PSG7Q13046 419 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 EFNB3Q15768 340 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 HES3Q5TGS1 186 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 TRAT1Q6PIZ9 186 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 MIR17HGQ75NE6 70 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 ARL6IP6Q8N6S5 226 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 SLC25A40Q8TBP6 338 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 LOC102723996A0A087X1L8 192 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 TIMM8AO60220 97 aaPredicted RBP9.5□□□□□ -0.89
TRUB1-201ENST00000298746 HOXC12P31275 282 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 LINC00310P59036 64 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 KRTAP27-1Q3LI81 207 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 FAM122AQ96E09 287 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 HCFC1P51610 2035 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 CACNA1GO43497 2377 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 HSBP1L1C9JCN9 74 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 NPIPB11E5RHQ5 1161 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 NPY1RP25929 384 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 GPR6P46095 362 aaPredicted RBP9.5□□□□□ -0.89
TRUB1-201ENST00000298746 GNB1LQ9BYB4 327 aa9.5□□□□□ -0.89
TRUB1-201ENST00000298746 COL5A1P20908 1838 aaPredicted RBP9.5□□□□□ -0.89
TRUB1-201ENST00000298746 INTS1Q8N201 2190 aaKnown RBP9.49□□□□□ -0.89
TRUB1-201ENST00000298746 NBEAQ8NFP9 2946 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 CELA3BP08861 270 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 IGFBP2P18065 325 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 TSPOP30536 169 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 CEACAM8P31997 349 aaPredicted RBP9.49□□□□□ -0.89
TRUB1-201ENST00000298746 RPL39P5Q59GN2 51 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 SAPCD1Q5SSQ6 148 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 OR13A1Q8NGR1 328 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 OR5B3Q8NH48 314 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 DEFB127Q9H1M4 99 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 PRDM6Q9NQX0 595 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 LOXL2Q9Y4K0 774 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 TRIOBPQ9H2D6 2365 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 TRAV3A0A0B4J244 114 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms