RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 GPR183P32249 361 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 BMI1P35226 326 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 TIMM50Q3ZCQ8 353 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 ZNF66Q6ZN08 573 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 RBPMS2Q6ZRY4 209 aaKnown RBP11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 Q6ZWC4 215 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 SSX9Q7RTT3 188 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 MFSD4AQ8N468 514 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 GPHA2Q96T91 129 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 BET1LQ9NYM9 111 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 ANXA10Q9UJ72 324 aa11.89□□□□□ -0.51
TMEM41A-201ENST00000296254 TRDV1A0A1B0GX56 115 aa11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 ATF4P18848 351 aaPredicted RBP11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 APOC4P55056 127 aa11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 OR2B8PP59922 312 aa11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 DEFB135Q30KP9 77 aa11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 ZNF585BQ52M93 769 aa11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 CEMP1Q6PRD7 247 aaPredicted RBP11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 OR4A5Q8NH83 315 aa11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 ZNF502Q8TBZ5 544 aa11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 SPAG8Q99932 426 aaPredicted RBP11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 KRTAP17-1Q9BYP8 105 aa11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 MRPL27Q9P0M9 148 aaKnown RBP11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 UFC1Q9Y3C8 167 aa11.88□□□□□ -0.51
TMEM41A-201ENST00000296254 IGLC7A0M8Q6 106 aa11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 SMIM30A4D0T7 59 aa11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 SPRY2O43597 315 aa11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 SSX5O60225 188 aa11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 ELLP55199 621 aaPredicted RBP11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 GNG2P59768 71 aa11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 C22orf42Q6IC83 251 aa11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 NRG4Q8WWG1 115 aa11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 TMEM190Q8WZ59 177 aa11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 C5orf66Q9H5L9 145 aa11.87□□□□□ -0.51
TMEM41A-201ENST00000296254 IGHV3-35A0A0C4DH35 117 aa11.86□□□□□ -0.51
TMEM41A-201ENST00000296254 RBFOX2O43251 390 aaKnown RBP eCLIP11.86□□□□□ -0.51
TMEM41A-201ENST00000296254 TNFSF12O43508 249 aa11.86□□□□□ -0.51
TMEM41A-201ENST00000296254 SCGNO76038 276 aa11.86□□□□□ -0.51
TMEM41A-201ENST00000296254 MSMO1Q15800 293 aa11.86□□□□□ -0.51
TMEM41A-201ENST00000296254 PLET1Q6UQ28 207 aa11.86□□□□□ -0.51
TMEM41A-201ENST00000296254 ZNF436Q9C0F3 470 aaPredicted RBP11.86□□□□□ -0.51
TMEM41A-201ENST00000296254 HRASLSQ9HDD0 168 aa11.86□□□□□ -0.51
TMEM41A-201ENST00000296254 KIR2DL5BA0A0G2JN68 375 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 KIR2DL5BA0A0G2JPC4 375 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 NOTOA8MTQ0 251 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 UBE2CO00762 179 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 TSPAN4O14817 238 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 PTBP1P26599 531 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 POU2AF1Q16633 256 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 ODF3L2Q3SX64 289 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 SLC38A6Q8IZM9 456 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 SPAG16Q8N0X2 631 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 KIR2DL5AQ8N109 375 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 OR13F1Q8NGS4 319 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 KIR2DL5BQ8NHK3 375 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 SECTM1Q8WVN6 248 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 SRSF8Q9BRL6 282 aaKnown RBP11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 AIFM2Q9BRQ8 373 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 THYN1Q9P016 225 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 UBQLN2Q9UHD9 624 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 KLK5Q9Y337 293 aaPredicted RBP11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 VPS13DQ5THJ4 4388 aa11.85□□□□□ -0.51
TMEM41A-201ENST00000296254 TGOLN2O43493 480 aa11.84□□□□□ -0.51
TMEM41A-201ENST00000296254 FGF2P09038 288 aa11.84□□□□□ -0.51
TMEM41A-201ENST00000296254 TAS2R31P59538 309 aa11.84□□□□□ -0.51
TMEM41A-201ENST00000296254 RPP25LQ8N5L8 163 aaKnown RBP11.84□□□□□ -0.51
TMEM41A-201ENST00000296254 LGALS14Q8TCE9 139 aa11.84□□□□□ -0.51
TMEM41A-201ENST00000296254 RNF183Q96D59 192 aa11.84□□□□□ -0.51
TMEM41A-201ENST00000296254 CCL28Q9NRJ3 127 aa11.84□□□□□ -0.51
TMEM41A-201ENST00000296254 BLOC1S6Q9UL45 172 aa11.84□□□□□ -0.51
TMEM41A-201ENST00000296254 DNAH6Q9C0G6 4158 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 TRAV3A0A0B4J244 114 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 SULT1C2O00338 296 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 PPYP01298 95 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 NQO2P16083 231 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 FCGR2CP31995 323 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 ARPC4P59998 168 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 TMEM217Q8N7C4 229 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 STPG3Q8N7X2 389 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 GDPD1Q8N9F7 314 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 ZBTB34Q8NCN2 500 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 VN1R17PQ8TDU5 208 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 QTRT1Q9BXR0 403 aaKnown RBP11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 COMMD5Q9GZQ3 224 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 DAPK2Q9UIK4 370 aa11.83□□□□□ -0.52
TMEM41A-201ENST00000296254 UPK2O00526 184 aa11.82□□□□□ -0.52
TMEM41A-201ENST00000296254 S1PR2O95136 353 aa11.82□□□□□ -0.52
TMEM41A-201ENST00000296254 HPRT1P00492 218 aa11.82□□□□□ -0.52
TMEM41A-201ENST00000296254 CATR1Q13166 79 aa11.82□□□□□ -0.52
TMEM41A-201ENST00000296254 ZNF773Q6PK81 442 aa11.82□□□□□ -0.52
TMEM41A-201ENST00000296254 BEST4Q8NFU0 473 aa11.82□□□□□ -0.52
TMEM41A-201ENST00000296254 BSCL2Q96G97 398 aaPredicted RBP11.82□□□□□ -0.52
TMEM41A-201ENST00000296254 TMEM140Q9NV12 185 aa11.82□□□□□ -0.52
TMEM41A-201ENST00000296254 RHBDL2Q9NX52 303 aa11.82□□□□□ -0.52
TMEM41A-201ENST00000296254 PCLOQ9Y6V0 5065 aa11.82□□□□□ -0.52
TMEM41A-201ENST00000296254 OR2T8A6NH00 312 aa11.81□□□□□ -0.52
TMEM41A-201ENST00000296254 OR4C46A6NHA9 309 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms