RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 LINC01548A6NM66 108 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 RBMXL2O75526 392 aaKnown RBP12.56□□□□□ -0.4
MRPL55-201ENST00000295008 ACTL6BO94805 426 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 CNIH1O95406 144 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 IGHG2P01859 326 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 FGF2P09038 288 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 MAS1LP35410 378 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 FXYD3Q14802 87 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 TMEM95Q3KNT9 176 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 THOC7Q6I9Y2 204 aaKnown RBP12.56□□□□□ -0.4
MRPL55-201ENST00000295008 ZNF562Q6V9R5 426 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 SLC35E3Q7Z769 313 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 PRIMA1Q86XR5 153 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 Q8N2B8 174 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 GRPEL2Q8TAA5 225 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 ABHD5Q8WTS1 349 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 ARPC1AQ92747 370 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 PARP11Q9NR21 331 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 FBXO7Q9Y3I1 522 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 OR51B2Q9Y5P1 312 aa12.56□□□□□ -0.4
MRPL55-201ENST00000295008 FAM25EA8MYX2 175 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 ATP6V0E1O15342 81 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 ST8SIA3O43173 380 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 KCNAB3O43448 404 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 OPN1MWP04001 364 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 OPN1MW2P0DN77 364 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 OPN1MW3P0DN78 364 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 SLC25A6P12236 298 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 RPL27AP46776 148 aaKnown RBP12.55□□□□□ -0.4
MRPL55-201ENST00000295008 ARSJQ5FYB0 599 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-201ENST00000295008 OR1S1Q8NH92 325 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 SRSF12Q8WXF0 261 aaKnown RBP12.55□□□□□ -0.4
MRPL55-201ENST00000295008 OR10C1Q96KK4 312 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 SPIN2AQ99865 258 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 SPIN2BQ9BPZ2 258 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 FAM103A1Q9BTL3 118 aaKnown RBP12.55□□□□□ -0.4
MRPL55-201ENST00000295008 COMMD5Q9GZQ3 224 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-201ENST00000295008 COA4Q9NYJ1 87 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 MGAT4CQ9UBM8 478 aa12.55□□□□□ -0.4
MRPL55-201ENST00000295008 TEX50A0A1B0GTY4 177 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 C13orf42A0A1B0GVH6 325 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 A0A1B0GW64 132 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 C5orf51A6NDU8 294 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 CGB1A6NKQ9 187 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 E7EUB6 86 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 PITX3O75364 302 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 TSPAN9O75954 239 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 NXPH3O95157 252 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 IAH1Q2TAA2 248 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-201ENST00000295008 AARDQ4LEZ3 155 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 ZNF429Q86V71 674 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 OR5M8Q8NGP6 311 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 MED28Q9H204 178 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 FKBP11Q9NYL4 201 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 ZNF257Q9Y2Q1 563 aa12.54□□□□□ -0.4
MRPL55-201ENST00000295008 TEX22C9J3V5 150 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 NDUFA7O95182 113 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 SIX6O95475 246 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 EGR2P11161 476 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-201ENST00000295008 VDAC2P45880 294 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-201ENST00000295008 RRAS2P62070 204 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-201ENST00000295008 FCN2Q15485 313 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 SPINK9Q5DT21 86 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 GSG1LQ6UXU4 331 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-201ENST00000295008 ZBTB8BQ8NAP8 495 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-201ENST00000295008 OR1L8Q8NGR8 309 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 OR5B3Q8NH48 314 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 OR2T6Q8NHC8 308 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 FYTTD1Q96QD9 318 aaKnown RBP12.53□□□□□ -0.4
MRPL55-201ENST00000295008 PDCD10Q9BUL8 212 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 HINT2Q9BX68 163 aa12.53□□□□□ -0.4
MRPL55-201ENST00000295008 MSGN1A6NI15 193 aa12.52□□□□□ -0.41
MRPL55-201ENST00000295008 AP4M1O00189 453 aa12.52□□□□□ -0.41
MRPL55-201ENST00000295008 IFNA17P01571 189 aa12.52□□□□□ -0.41
MRPL55-201ENST00000295008 CRIP2P52943 208 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-201ENST00000295008 HSPE1P61604 102 aaKnown RBP12.52□□□□□ -0.41
MRPL55-201ENST00000295008 OR11H7Q8NGC8 314 aa12.52□□□□□ -0.41
MRPL55-201ENST00000295008 OR4D5Q8NGN0 318 aa12.52□□□□□ -0.41
MRPL55-201ENST00000295008 SGMS2Q8NHU3 365 aa12.52□□□□□ -0.41
MRPL55-201ENST00000295008 NOL4LQ96MY1 436 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-201ENST00000295008 C16orf95Q9H693 158 aa12.52□□□□□ -0.41
MRPL55-201ENST00000295008 NDUFA4L2Q9NRX3 87 aa12.52□□□□□ -0.41
MRPL55-201ENST00000295008 LINC00527Q9UJ94 153 aa12.52□□□□□ -0.41
MRPL55-201ENST00000295008 HMX3A6NHT5 357 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 IGF1P05019 195 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 TRAPPC2P0DI81 140 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 TRAPPC2BP0DI82 140 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 APELAP0DMC3 54 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 HKR1P10072 659 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 CXCL3P19876 107 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 H2BFSP57053 126 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 PRCDQ00LT1 54 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 ECSCRQ19T08 205 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 CXorf66Q5JRM2 361 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-201ENST00000295008 ASPHD1Q5U4P2 390 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 STPG2Q8N412 459 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 OR10W1Q8NGF6 305 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 OR52E5Q8NH55 327 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms