RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 TMEM68Q96MH6 324 aa7.49□□□□□ -1.21
CCDC58-201ENST00000291458 B9D2Q9BPU9 175 aa7.49□□□□□ -1.21
CCDC58-201ENST00000291458 ELOVL1Q9BW60 279 aa7.49□□□□□ -1.21
CCDC58-201ENST00000291458 HINT2Q9BX68 163 aa7.49□□□□□ -1.21
CCDC58-201ENST00000291458 RANGRFQ9HD47 186 aaPredicted RBP7.49□□□□□ -1.21
CCDC58-201ENST00000291458 ZC4H2Q9NQZ6 224 aa7.49□□□□□ -1.21
CCDC58-201ENST00000291458 TMEM140Q9NV12 185 aa7.49□□□□□ -1.21
CCDC58-201ENST00000291458 EXTL2Q9UBQ6 330 aa7.49□□□□□ -1.21
CCDC58-201ENST00000291458 PEF1Q9UBV8 284 aaKnown RBP7.49□□□□□ -1.21
CCDC58-201ENST00000291458 ANAPC10Q9UM13 185 aa7.49□□□□□ -1.21
CCDC58-201ENST00000291458 SORL1Q92673 2214 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 FAM223BA6NKX1 122 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 BMPR1BO00238 502 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 RGS5O15539 181 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 DEFA4P12838 97 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 GP9P14770 177 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 PGAM2P15259 253 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 GNRHRP30968 328 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 RCVRNP35243 200 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 LPAR6P43657 344 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 INSL3P51460 131 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 PPP5CP53041 499 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 DCTN2Q13561 401 aaKnown RBP7.48□□□□□ -1.21
CCDC58-201ENST00000291458 SPCS2Q15005 226 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 ZNF343Q6P1L6 599 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 CLVS1Q8IUQ0 354 aaPredicted RBP7.48□□□□□ -1.21
CCDC58-201ENST00000291458 FAM223AQ8IWN6 122 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 ZBTB34Q8NCN2 500 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 GPX8Q8TED1 209 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 GIMAP1Q8WWP7 306 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 AP3S1Q92572 193 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 USMG5Q96IX5 58 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 FBXL7Q9UJT9 491 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 ZNF257Q9Y2Q1 563 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 NSG2Q9Y328 171 aa7.48□□□□□ -1.21
CCDC58-201ENST00000291458 GPR31O00270 319 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 PGLYRP1O75594 196 aaPredicted RBP7.47□□□□□ -1.21
CCDC58-201ENST00000291458 NDUFB8O95169 186 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 HPRT1P00492 218 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 KRASP01116 189 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 ZNF735P0CB33 412 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 NQO2P16083 231 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 EDN2P20800 178 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 G6PCP35575 357 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 TAS2R31P59538 309 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 MSMO1Q15800 293 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 VAX1Q5SQQ9 334 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 SLC25A42Q86VD7 318 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 LYSMD2Q8IV50 215 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 LAX1Q8IWV1 398 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 TTC9CQ8N5M4 171 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 OR9G4Q8NGQ1 327 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 OR6F1Q8NGZ6 308 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 OR52I2Q8NH67 350 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 RNF141Q8WVD5 230 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 COMMD5Q9GZQ3 224 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 LSM4Q9Y4Z0 139 aaKnown RBP7.47□□□□□ -1.21
CCDC58-201ENST00000291458 SMAD5-AS1Q9Y6J3 95 aa7.47□□□□□ -1.21
CCDC58-201ENST00000291458 IGHV3-21A0A0B4J1V1 117 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 MFSD2BA6NFX1 497 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 CGB1A6NKQ9 187 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 MARCH11A6NNE9 402 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 UPK2O00526 184 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 RBFOX2O43251 390 aaKnown RBP eCLIP7.46□□□□□ -1.22
CCDC58-201ENST00000291458 ZNF182P17025 639 aaPredicted RBP7.46□□□□□ -1.22
CCDC58-201ENST00000291458 NAT1P18440 290 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 PI3P19957 117 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 PSMB6P28072 239 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 MAS1LP35410 378 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 MECP2P51608 486 aaKnown RBP7.46□□□□□ -1.22
CCDC58-201ENST00000291458 FAAP20Q6NZ36 180 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 CLEC19AQ6UXS0 136 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 TBC1D26Q86UD7 250 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 CMTM1Q8IZ96 169 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 NECAP1Q8NC96 275 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 OR10W1Q8NGF6 305 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 OR4A5Q8NH83 315 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 DYNLRB2Q8TF09 96 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 FCAMRQ8WWV6 532 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 DGCR14Q96DF8 476 aaKnown RBP7.46□□□□□ -1.22
CCDC58-201ENST00000291458 CCDC140Q96MF4 163 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 SCPEP1Q9HB40 452 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 SLC2A9Q9NRM0 540 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 BET1LQ9NYM9 111 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 COMMD9Q9P000 198 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 KLK11Q9UBX7 282 aa7.46□□□□□ -1.22
CCDC58-201ENST00000291458 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.45□□□□□ -1.22
CCDC58-201ENST00000291458 TRBV9A0A0B4J1U6 114 aa7.45□□□□□ -1.22
CCDC58-201ENST00000291458 IGHV3-35A0A0C4DH35 117 aa7.45□□□□□ -1.22
CCDC58-201ENST00000291458 IGLC7A0M8Q6 106 aa7.45□□□□□ -1.22
CCDC58-201ENST00000291458 NPIPB5A8MRT5 1133 aa7.45□□□□□ -1.22
CCDC58-201ENST00000291458 NOL3O60936 208 aaKnown RBP7.45□□□□□ -1.22
CCDC58-201ENST00000291458 OR2C1O95371 312 aa7.45□□□□□ -1.22
CCDC58-201ENST00000291458 IFNA6P05013 189 aa7.45□□□□□ -1.22
CCDC58-201ENST00000291458 CSN3P07498 182 aa7.45□□□□□ -1.22
CCDC58-201ENST00000291458 S100GP29377 79 aa7.45□□□□□ -1.22
CCDC58-201ENST00000291458 ARL3P36405 182 aa7.45□□□□□ -1.22
CCDC58-201ENST00000291458 ALDH3B2P48448 385 aa7.45□□□□□ -1.22
CCDC58-201ENST00000291458 KLF5Q13887 457 aaPredicted RBP7.45□□□□□ -1.22
CCDC58-201ENST00000291458 SCGB2B2Q4G0G5 96 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms