RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ARPC4P59998 168 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 KLK9Q2XQG4 91 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 KCTD21Q4G0X4 260 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 FAM209BQ5JX69 171 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 LCN12Q6JVE5 192 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 Q8N402 240 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 OR13F1Q8NGS4 319 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 OR2K2Q8NGT1 345 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 SECTM1Q8WVN6 248 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 GIMAP1Q8WWP7 306 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 MISP3Q96FF7 219 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 FYTTD1Q96QD9 318 aaKnown RBP7.37□□□□□ -1.23
VPS41-201ENST00000265745 ARPC5LQ9BPX5 153 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 KLK9Q9UKQ9 250 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 TNFSF12O43508 249 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 NDUFB8O95169 186 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 OR2C1O95371 312 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 HLA-AP01891 365 aaKnown RBP7.36□□□□□ -1.23
VPS41-201ENST00000265745 FCER2P06734 321 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 LYL1P12980 280 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 PSMB6P28072 239 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 KIR2DS2P43631 304 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 CBX5P45973 191 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 RPL8P62917 257 aaKnown RBP7.36□□□□□ -1.23
VPS41-201ENST00000265745 HAGHQ16775 308 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 DEFB114Q30KQ6 69 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 CD300EQ496F6 205 aaPredicted RBP7.36□□□□□ -1.23
VPS41-201ENST00000265745 OR4A47Q6IF82 309 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 C19orf35Q6ZS72 473 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 SSX9Q7RTT3 188 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 GTSCR1Q86UQ5 136 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 GPHB5Q86YW7 130 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 SPAG16Q8N0X2 631 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 OR4A5Q8NH83 315 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 AIFM2Q9BRQ8 373 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 SLC5A7Q9GZV3 580 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 BET1LQ9NYM9 111 aa7.36□□□□□ -1.23
VPS41-201ENST00000265745 DPPA5A6NC42 116 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 CGB1A6NKQ9 187 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 ZNF785A8K8V0 405 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 PPP5D1E7EU14 171 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 LGALS9O00182 355 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 SULT1C2O00338 296 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 XRCC3O43542 346 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 GGCTO75223 188 aaKnown RBP7.35□□□□□ -1.23
VPS41-201ENST00000265745 DHFRP00374 187 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 FOLR2P14207 255 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 MYOD1P15172 320 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 CTRB1P17538 263 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 HLA-GP17693 338 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 GNRHRP30968 328 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 RPS19P39019 145 aaKnown RBP7.35□□□□□ -1.23
VPS41-201ENST00000265745 TAS2R31P59538 309 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 OR2B8PP59922 312 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 POU2AF1Q16633 256 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 TIMM50Q3ZCQ8 353 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 CTRB2Q6GPI1 263 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 DHRS11Q6UWP2 260 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 CROCCP3Q8IVE0 287 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 OR5AP2Q8NGF4 316 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 S100A16Q96FQ6 103 aaKnown RBP7.35□□□□□ -1.23
VPS41-201ENST00000265745 TUBA4BQ9H853 241 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 EDA2RQ9HAV5 297 aa7.35□□□□□ -1.23
VPS41-201ENST00000265745 TENM2Q9NT68 2774 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 TRAV3A0A0B4J244 114 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 MEIS3P1A6NDR6 274 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 C2orf70A6NJV1 201 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 UPK2O00526 184 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 HPRT1P00492 218 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 IGHV3-23P01764 117 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 TGFBR1P36897 503 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 RFX2P48378 723 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 FXYD4P59646 89 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 LINC00322Q6ZN03 302 aaPredicted RBP7.34□□□□□ -1.23
VPS41-201ENST00000265745 ZNF818PQ6ZRF7 136 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 LAX1Q8IWV1 398 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 CD300LFQ8TDQ1 290 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 SPATA25Q9BR10 227 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 PLEKHA2Q9HB19 425 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 HRASLSQ9HDD0 168 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 TECRQ9NZ01 308 aaKnown RBP7.34□□□□□ -1.23
VPS41-201ENST00000265745 ANAPC10Q9UM13 185 aa7.34□□□□□ -1.23
VPS41-201ENST00000265745 IGLV11-55A0A075B6I3 123 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 IGLC7A0M8Q6 106 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 REG1AP05451 166 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 CLEC3BP05452 202 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 FGF2P09038 288 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 CD7P09564 240 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 DEFA4P12838 97 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 NQO2P16083 231 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 HIST1H1BP16401 226 aaKnown RBP7.33□□□□□ -1.24
VPS41-201ENST00000265745 EDN2P20800 178 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 CBLN1P23435 193 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 ARL3P36405 182 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 CATR1Q13166 79 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 FAM106AQ4KMX7 169 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 CLEC19AQ6UXS0 136 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 TMEM17Q86X19 198 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 SAMD12Q8N8I0 201 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 OR51H1Q8NH63 302 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms