RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 TRGV3P03979 118 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 CTSDP07339 412 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 IL6RP08887 468 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 HLA-GP17693 338 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 FAUP35544 74 aaKnown RBP5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 RAB9AP51151 201 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 AP3S2P59780 193 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 FOXE3Q13461 319 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 C19orf54Q5BKX5 351 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 PRR31Q5SQ13 230 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 ZNF695Q8IW36 515 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 GDPD1Q8N9F7 314 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 CCDC71LQ8N9Z2 235 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 MINDY2Q8NBR6 621 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 VSTM2AQ8TAG5 236 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 ZFAND1Q8TCF1 268 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 CD300LFQ8TDQ1 290 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 PTTG2Q9NZH5 202 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 COMMD9Q9P000 198 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 CGB1A6NKQ9 187 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 TEX22C9J3V5 150 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 H0Y980 276 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 IGKV1-5P01602 117 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 VAMP1P23763 118 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 TMEM267Q0VDI3 215 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 ETV3LQ6ZN32 361 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 ZNF486Q96H40 463 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 SEC22AQ96IW7 307 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 COMMD5Q9GZQ3 224 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 NAA60Q9H7X0 242 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 SLC2A8Q9NY64 477 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 BET1LQ9NYM9 111 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 GPR132Q9UNW8 380 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 FLVCR2Q9UPI3 526 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 SORL1Q92673 2214 aa5.64□□□□□ -1.51
DEPDC1B-201ENST00000265036 UPK2O00526 184 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 CREBL2O60519 120 aaPredicted RBP5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 IGHV3-23P01764 117 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 ELANEP08246 267 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 PTBP1P26599 531 aaKnown RBP eCLIP5.63□□□□□ -1.517e-8■■■■■ 26.9
DEPDC1B-201ENST00000265036 BTCP35070 178 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 RND3P61587 244 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 ZNF45Q02386 682 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 AKIRIN2Q53H80 203 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 H2BFWTQ7Z2G1 175 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 OR4F17Q8NGA8 305 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 RAX2Q96IS3 184 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 OR4F4Q96R69 305 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 ANKRD34BA5PLL1 514 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 CRYM-AS1A6NIL9 109 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 OR2J3O76001 311 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 PRB2P02812 416 aaPredicted RBP5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 CRIP2P52943 208 aaPredicted RBP5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 SUPT4H1P63272 117 aaKnown RBP5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 POU2AF1Q16633 256 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 OXLD1Q5BKU9 147 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 TMEM268Q5VZI3 342 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 FAM219AQ8IW50 185 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 OR11H1Q8NG94 326 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 GLYATL2Q8WU03 294 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 SPIN2AQ99865 258 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 SPIN2BQ9BPZ2 258 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 BATF3Q9NR55 127 aa5.63□□□□□ -1.51
DEPDC1B-201ENST00000265036 DNAH3Q8TD57 4116 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 IGHV3-21A0A0B4J1V1 117 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 G3V4G9 280 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 SNAPC5O75971 98 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 TRBV12-3P01733 135 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 CD40LGP29965 261 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 KIAA0141Q14154 515 aaPredicted RBP5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 SURF2Q15527 256 aaPredicted RBP5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 C11orf87Q6NUJ2 197 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 COMMD1Q8N668 190 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 ZNF491Q8N8L2 437 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 QTRT1Q9BXR0 403 aaKnown RBP5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 TMEM222Q9H0R3 208 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 OR51B2Q9Y5P1 312 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 IGHV4OR15-8A0A075B7B6 117 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 A0A087WW49 117 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 IGLC7A0M8Q6 106 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 C15orf61A6NNL5 157 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 CCL24O00175 119 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 PLA2G10O15496 165 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 OR13C7P0DN81 318 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 IGLL1P15814 213 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 UCP1P25874 307 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 ECI1P42126 302 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 MECP2P51608 486 aaKnown RBP5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 SLURP1P55000 103 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 UBE2MP61081 183 aaKnown RBP5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 RHOGP84095 191 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 WT1-ASQ06250 92 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 PPP1R1AQ13522 171 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 RBMS2Q15434 407 aaKnown RBP5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 SGPP2Q8IWX5 399 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 MRPL41Q8IXM3 137 aaKnown RBP5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 TCTEX1D1Q8N7M0 179 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 SLC35G3Q8N808 338 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 RNF152Q8N8N0 203 aa5.62□□□□□ -1.51
DEPDC1B-201ENST00000265036 OR5M8Q8NGP6 311 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms