RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 RPL23P62829 140 aaKnown RBP16.59■□□□□ 0.25
CSPG5-201ENST00000264723 IMMP2LQ96T52 175 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 FKBP11Q9NYL4 201 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 SLC17A3O00476 420 aa16.58■□□□□ 0.25
CSPG5-201ENST00000264723 CD40P25942 277 aa16.58■□□□□ 0.25
CSPG5-201ENST00000264723 DDTP30046 118 aa16.58■□□□□ 0.25
CSPG5-201ENST00000264723 CAMPP49913 170 aa16.58■□□□□ 0.25
CSPG5-201ENST00000264723 PSMG3Q9BT73 122 aaPredicted RBP16.58■□□□□ 0.25
CSPG5-201ENST00000264723 SH2D2AQ9NP31 389 aa16.58■□□□□ 0.25
CSPG5-201ENST00000264723 TMEM140Q9NV12 185 aa16.58■□□□□ 0.25
CSPG5-201ENST00000264723 NDUFS6O75380 124 aaKnown RBP16.58■□□□□ 0.24
CSPG5-201ENST00000264723 FXYD3Q14802 87 aa16.58■□□□□ 0.24
CSPG5-201ENST00000264723 IQCJQ1A5X6 159 aa16.58■□□□□ 0.24
CSPG5-201ENST00000264723 FAM122AQ96E09 287 aa16.58■□□□□ 0.24
CSPG5-201ENST00000264723 DMRT1Q9Y5R6 373 aa16.58■□□□□ 0.24
CSPG5-201ENST00000264723 YLPM1P49750 1951 aaKnown RBP16.58■□□□□ 0.24
CSPG5-201ENST00000264723 VPS13AQ96RL7 3174 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 IQCF6A8MYZ5 107 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 RNF224P0DH78 156 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 CNN1P51911 297 aaKnown RBP16.57■□□□□ 0.24
CSPG5-201ENST00000264723 WDR82Q6UXN9 313 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 SFXN3Q9BWM7 321 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 C1QTNF9P0C862 333 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 ZNF585BQ52M93 769 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 TCF23Q7RTU1 214 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 P2RX4Q99571 388 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 SNURFLB1AK76 121 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 IGKV1-39P01597 117 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 IGKV1D-39P04432 117 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 PKIAP61925 76 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 CDPF1Q6NVV7 123 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 RAB1CQ92928 201 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 ANAPC16Q96DE5 110 aa16.57■□□□□ 0.24
CSPG5-201ENST00000264723 IGHV1-18A0A0C4DH31 117 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 ZNF714Q96N38 554 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 MED12LQ86YW9 2145 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 MYO15AQ9UKN7 3530 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 TMEM131Q92545 1883 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 RPL11P62913 178 aaKnown RBP16.56■□□□□ 0.24
CSPG5-201ENST00000264723 SLC35E4Q6ICL7 350 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 TEPPQ6URK8 271 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 DERL1Q9BUN8 251 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 RAB1BQ9H0U4 201 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 OR51B2Q9Y5P1 312 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 ARFGEF3Q5TH69 2177 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 CBLN1P23435 193 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 HCP5Q6MZN7 132 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 RPRMLQ8N4K4 120 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 RNF138Q8WVD3 245 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 BORCS7Q96B45 105 aa16.56■□□□□ 0.24
CSPG5-201ENST00000264723 VN1R17PQ8TDU5 208 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 GTF3AQ92664 365 aaKnown RBP16.55■□□□□ 0.24
CSPG5-201ENST00000264723 TCF19Q9Y242 345 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 RRHO14718 337 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 CD33P20138 364 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 PAX6P26367 422 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 AMTP48728 403 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 BSPH1Q075Z2 132 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 COLCA1Q6ZS62 124 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 CYP2G1PQ6ZSU1 146 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 HILPDAQ9Y5L2 63 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 J3QW42 95 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 Q6ZPA2 131 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 SLC24A4Q8NFF2 622 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 UBTD1Q9HAC8 227 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 KIR2DS2P43631 304 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 PRRX1P54821 245 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 TBX15Q96SF7 602 aa16.55■□□□□ 0.24
CSPG5-201ENST00000264723 FAM90A2PQ658T7 463 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 OR1L6Q8NGR2 347 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 STARD4Q96DR4 205 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 NPVFQ9HCQ7 196 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 A0A087WWC5 75 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 OR10J1P30954 320 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 Q6P435 159 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 OR8I2Q8N0Y5 310 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 MRPL37Q9BZE1 423 aaKnown RBP16.54■□□□□ 0.24
CSPG5-201ENST00000264723 SRD5A3Q9H8P0 318 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 USP34Q70CQ2 3546 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 SCO2A0A1W2PP80 73 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 HELTA6NFD8 242 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 BPIFB3P59826 476 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 SPCS3P61009 180 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 UBE2L3P68036 154 aaKnown RBP16.54■□□□□ 0.24
CSPG5-201ENST00000264723 SSX7Q7RTT5 188 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 CBLN4Q9NTU7 201 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 RNF115Q9Y4L5 304 aa16.54■□□□□ 0.24
CSPG5-201ENST00000264723 FAM90A26D6RGX4 464 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 PDE6DO43924 150 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 PRB4P10163 310 aaPredicted RBP16.53■□□□□ 0.24
CSPG5-201ENST00000264723 ZNF253O75346 499 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 OR9G9P0C7N8 305 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 CRYBB3P26998 211 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 TPPP2P59282 170 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 OR5B3Q8NH48 314 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 PRNDQ9UKY0 176 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 SLC25A17O43808 307 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 CXorf1O96002 111 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 OR5I1Q13606 314 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 ATG101Q9BSB4 218 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms