RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 SDHCQ99643 169 aaPredicted RBP12.83□□□□□ -0.36
NID1-201ENST00000264187 TMEM74BQ9NUR3 256 aa12.83□□□□□ -0.36
NID1-201ENST00000264187 PIN1P1O15428 100 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 Q96M66 194 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 RPRMQ9NS64 109 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 CA7P43166 264 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 CKS1BP61024 79 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 PAX2Q02962 417 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 IGKV1D-33P01593 117 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 IGKV1-33P01594 117 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 TSPAN7P41732 249 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 SCARF2Q96GP6 870 aaPredicted RBP12.82□□□□□ -0.36
NID1-201ENST00000264187 NPCDR1Q9BY65 106 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 ZNF729A6NN14 1252 aaPredicted RBP12.82□□□□□ -0.36
NID1-201ENST00000264187 ATP5G3P48201 142 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 TBR1Q16650 682 aa12.82□□□□□ -0.36
NID1-201ENST00000264187 FNDC4Q9H6D8 234 aaPredicted RBP12.82□□□□□ -0.36
NID1-201ENST00000264187 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
NID1-201ENST00000264187 LEPP41159 167 aa12.81□□□□□ -0.36
NID1-201ENST00000264187 PRSS53Q2L4Q9 553 aa12.81□□□□□ -0.36
NID1-201ENST00000264187 SELENOKQ9Y6D0 94 aa12.81□□□□□ -0.36
NID1-201ENST00000264187 RCC1LQ96I51 464 aaKnown RBP12.81□□□□□ -0.36
NID1-201ENST00000264187 CTSBP07858 339 aa12.81□□□□□ -0.36
NID1-201ENST00000264187 C1orf100Q5SVJ3 147 aa12.81□□□□□ -0.36
NID1-201ENST00000264187 GATAD1Q8WUU5 269 aa12.81□□□□□ -0.36
NID1-201ENST00000264187 WFDC12Q8WWY7 111 aa12.81□□□□□ -0.36
NID1-201ENST00000264187 A0A1B0GUL6 1792 aa12.81□□□□□ -0.36
NID1-201ENST00000264187 DDX60Q8IY21 1712 aaKnown RBP12.81□□□□□ -0.36
NID1-201ENST00000264187 FAM90A10PA6NDY2 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A18PA6NE21 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A16PA6NEW6 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A20PA6NIJ5 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A8PA6NJQ4 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A7PA6NKC0 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A22PA8MWA6 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A12PA8MX19 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A5PA8MXJ8 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A23PA8MXZ1 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A15PP0C7V4 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A13PP0C7W8 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A14PP0C7W9 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FAM90A24PP0C7X0 464 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 NHP2Q9NX24 153 aaKnown RBP12.8□□□□□ -0.36
NID1-201ENST00000264187 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 ZNF708P17019 499 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 PTGDSP41222 190 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 VKORC1Q9BQB6 163 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 TOGARAM1Q9Y4F4 1720 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 PRR19A6NJB7 356 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 ATP5LO75964 103 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 POC1AQ8NBT0 407 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 SSBP4Q9BWG4 385 aaPredicted RBP12.8□□□□□ -0.36
NID1-201ENST00000264187 A0A1B0GUT8 65 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 SAMD13Q5VXD3 122 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 TCF23Q7RTU1 214 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 C19orf24Q9BVV8 132 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 IL36BQ9NZH7 164 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 SLC25A20O43772 301 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 ZP1P60852 638 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 G6PC2Q9NQR9 355 aa12.8□□□□□ -0.36
NID1-201ENST00000264187 FGF5P12034 268 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 PCOLCEQ15113 449 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 SMRP1Q8NCR6 262 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 NXT2Q9NPJ8 142 aaKnown RBP12.79□□□□□ -0.36
NID1-201ENST00000264187 TAF1P21675 1872 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.79□□□□□ -0.36
NID1-201ENST00000264187 RIPPLY3P57055 190 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 DEFB104AQ8WTQ1 72 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 TRBV5-7A0A0A0MS05 114 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 ASPHD2Q6ICH7 369 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 WDYHV1Q96HA8 205 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 IFI27L2Q9H2X8 130 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 TRAV2A0A0B4J234 112 aa12.79□□□□□ -0.36
NID1-201ENST00000264187 NPDC1Q9NQX5 325 aaPredicted RBP12.79□□□□□ -0.36
NID1-201ENST00000264187 GPX4P36969 197 aaPredicted RBP12.78□□□□□ -0.36
NID1-201ENST00000264187 KIR3DL3Q8N743 410 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 HS3ST3B1Q9Y662 390 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 DDX60LQ5H9U9 1706 aaKnown RBP12.78□□□□□ -0.36
NID1-201ENST00000264187 PPIFP30405 207 aaKnown RBP12.78□□□□□ -0.36
NID1-201ENST00000264187 GNG5P63218 68 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 NHLRC3Q5JS37 347 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 MIR17HGQ75NE6 70 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 CACNA1SQ13698 1873 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 IFITM2Q01629 132 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 FER1L6-AS1Q8NA97 138 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 SFXN3Q9BWM7 321 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 RPP21Q9H633 154 aaKnown RBP12.78□□□□□ -0.36
NID1-201ENST00000264187 UNC13CQ8NB66 2214 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 FAM216BQ8N7L0 139 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 OR52E5Q8NH55 327 aa12.78□□□□□ -0.36
NID1-201ENST00000264187 MSGN1A6NI15 193 aa12.77□□□□□ -0.36
NID1-201ENST00000264187 CD7P09564 240 aa12.77□□□□□ -0.36
NID1-201ENST00000264187 NPC2P61916 151 aa12.77□□□□□ -0.36
NID1-201ENST00000264187 OR10J3Q5JRS4 329 aa12.77□□□□□ -0.36
NID1-201ENST00000264187 CABIN1Q9Y6J0 2220 aa12.77□□□□□ -0.36
NID1-201ENST00000264187 C17orf98A8MV24 154 aa12.77□□□□□ -0.36
NID1-201ENST00000264187 FOXH1O75593 365 aa12.77□□□□□ -0.36
NID1-201ENST00000264187 PPP1R27Q86WC6 154 aa12.77□□□□□ -0.36
NID1-201ENST00000264187 TEX29Q8N6K0 151 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms